Effector profile
| PlantPEAD ID: PlantPEAD07341 | Uniprot ID: A0A4Q4NSC9 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 5599 | Pathogen type: Fungi |
| Species: Alternaria alternata | Strain: FERA 1177 | Other name: Alternaria rot fungus,Torula alternata |
| Gene name: | NCBI Gene ID: PDXD01000002 | |
| Entry name: A0A4Q4NSC9_ALTAL | Protein name: LysM domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCACTCTTTTTGTCAAGCTTGCTTCTCGCCGGCGCGGCGTTGGGTGCTCCTTTGCAGCCCTCTGACCCAGTCTTTACCAACGCGACCATCACCCCGCCCATCAACGGCACTACCCCTTCTCCTCTTCAGCCCGGCATCGTATCCAACTGCGATGAATACTACTTCGTAAAGCCTGGCGACATCTGCATCGACATCGCCAGCGCCAAGGGCATCACTCTCGACGACTTCCTTACCTGGAACCCCCAGGCCGGCGAGACATGCACCAACCTGCTCGCCGACACTTACGCCTGTGTGTCCGTAGTCGGGCATACCCCCACGCCTACCAAGCCCTCAAACGGAATCGAGACACCGAGGCCTATTCAGGAAGGCATGGTGGACAACTGCAACAAGTTCCATTTTGTCGAGAGCGGCGAGAGCTGCCCGGCTATTCAGAAGGAGTATGGAGTCAGCCTGGAGGATCTTGCCAAGTGGAACCCTGCTATCGAGGATGACTGCACAATGATGTGGGCAAACACCAATCTCTGCGTTGGAGTCATCGCTTGA
Protein sequence:
MSLFLSSLLLAGAALGAPLQPSDPVFTNATITPPINGTTPSPLQPGIVSNCDEYYFVKPGDICIDIASAKGITLDDFLTWNPQAGETCTNLLADTYACVSVVGHTPTPTKPSNGIETPRPIQEGMVDNCNKFHFVESGESCPAIQKEYGVSLEDLAKWNPAIEDDCTMMWANTNLCVGVIA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19252.8 | 181 | 4.15 | 0.04 | 38.18 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779
Pfam: PF01476
SMART: SM00257
KEGG:
PRINTS: