Effector profile
| PlantPEAD ID: PlantPEAD07425 | Uniprot ID: A0A1C7NR99 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 101091 | Pathogen type: Fungi |
| Species: Choanephora cucurbitarum | Strain: KUS-F28377 | Other name: |
| Gene name: | NCBI Gene ID: LUGH01000079 | |
| Entry name: A0A1C7NR99_9FUNG | Protein name: LysM domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAAGTTCACTGTTGCTGCTGCCACTCTTGCCCTCGTCTCTGCTGTTTCTGCCAAGTGCTTGAACGAATACACCGTTAAGGCCACTGATGATTGTGAATCTCTTAGCATTGTCCTCGGTGTCGAAAACGGCAAGTTCAACTGTACTCAACAACCCGGTGATGTTATCTGTTTGGACAAGCCTGCTGTTGAAAAGAGAGACTGGTTCTACAAGACCAAGGGCCTCCGTGGTAAGAAGTTGGCTCTTGCCAAGAAGAAGATTGCCTCTGCCAAGAAGCACAAGAAGACCACCAAGAAGGCTGCTAAGAAGACCACCAAGAAGGTTGCCAAGAAGACCACCAAGAAGGCTTCCACTGGTAAGTCCTCTTCTGGTAAGGCTTCTCAATCTCGCCCTGGTGACAACTGGAGCTCCACTCCTGCCAACGCTCCTTCCAACGCTGTCAGACACATCATCTCCACATGTACCAAGTACGCTACTGTCAAGTCTTCTGACTCTTGGTGTGAACCCTTCGCCCAAAGAAACGGTATCACTGCTGCTCAACTCTACTCCTGGAACGCTGGTCTCCACAGCTCCGGTAAGCACGTCTGTGACAACCTCGATGACGGTAGAGCCTACTGTGTCGGTGTCAAGAACTAA
Protein sequence:
MKFTVAAATLALVSAVSAKCLNEYTVKATDDCESLSIVLGVENGKFNCTQQPGDVICLDKPAVEKRDWFYKTKGLRGKKLALAKKKIASAKKHKKTTKKAAKKTTKKVAKKTTKKASTGKSSSGKASQSRPGDNWSSTPANAPSNAVRHIISTCTKYATVKSSDSWCEPFAQRNGITAAQLYSWNAGLHSSGKHVCDNLDDGRAYCVGVKN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 22663 | 211 | 9.86 | -0.552 | 34.73 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779
Pfam:
SMART:
KEGG:
PRINTS: