Effector profile
| PlantPEAD ID: PlantPEAD07463 | Uniprot ID: A0A7J6IBW4 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 474922 | Pathogen type: Fungi |
| Species: Colletotrichum gloeosporioides | Strain: strain Nara gc5 | Other name: |
| Gene name: | NCBI Gene ID: ANPB02000012 | |
| Entry name: A0A7J6IBW4_COLFN | Protein name: LysM domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTTCCTCAACACGGGCATCAACTCTAACTGCACTAACCTCTTCGCCCAAGAGAGCTACTATATCCAGGCGGTCGGTGATATTAATAACTACCCTGGCCGTCCCAGATACGTCTCAATCACTATTAACCCTAATAAGTCCTTCACCAGCGTCCCCTTCACCATGCTACCCAACGCCACCATAACCCTGGATCTGAGACCGACCGAGGTCCCATTGGCCACTGGAGTCCGCGACAACTGCGTCTTCTACTTTAAGGGCGACGAGTACCAGTACTCACCGGACGTGTTCGGCTACTGGAATAGCAACTGCGAGATCGCAGCGTCAAACTATAACGTCGACTTTGACAGCTTCGCCGCCTGGAACTCGCTCATAACAAACGTCACAGACCTAGCCATCTCCCTTGCGACGTTCCTCAAGTGGAATCCTGCCGTTAGCGTCAACTATACCCAGAACTTCTGGCTCGGACAGGCGTACTGCACGCACAGGGAGGGCCAGGGCGTCAGCATCACCCCCTCGCAGTCTGCCTCAACCACAACGACAGCCAAGCCCACCCCCCTAGCTCCCACGCATACTAGCTAA
Protein sequence:
MFLNTGINSNCTNLFAQESYYIQAVGDINNYPGRPRYVSITINPNKSFTSVPFTMLPNATITLDLRPTEVPLATGVRDNCVFYFKGDEYQYSPDVFGYWNSNCEIAASNYNVDFDSFAAWNSLITNVTDLAISLATFLKWNPAVSVNYTQNFWLGQAYCTHREGQGVSITPSQSASTTTTAKPTPLAPTHTS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 21276.7 | 192 | 4.94 | -0.207 | 28.88 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036779
Pfam:
SMART:
KEGG:
PRINTS: