Effector profile
PlantPEAD ID: PlantPEAD07547 Uniprot ID: R1GQW2 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 310453 Pathogen type: Fungi
Species: Botryosphaeria parva Strain: strain UCR-NP2 Other name: Grapevine canker fungus,Neofusicoccum parvum
Gene name: NCBI Gene ID: KB916212
Entry name: R1GQW2_BOTPV Protein name: LysM domain-containing protein
DOI:
Gene/Protein information
Gene sequence:
ATGGCGAATATGCAATGCAATCCTGTCGTCTTCACGTTCAAGCCCGGCAACTACTACAACGAGACTCTGCTCAAAGCCGCATGCACGTCGGACTGCGACTCGTCTCTGGCGTCTTGGGAAGCCGGTATTTTTGGCAGTTGCCACGACGTGCCATGGACCGATGCGTACAACGAAAGCGCTCCCATCGAGACCGTCCCAAATCTCGTTCGCTACAACTACAACCAGACGTGTCGAATGGACACGGGGAGATACTGCAATGCCGTGCTCGGGACTGCAGCGTCGTCCGGTGATGGTGGAAACTCTTCGGCATGCGACCTCTGCGCTGTCAAGGCTCTCCAGTTCGCCGCGGGGTCACCGTACTACGAGGGGCCGGTGCTGCAGGCGGAATCCGTCTATCAGAAGTACACATCTAGCTGTGGTGTCAGTAATTTACCCATGGCAACAACGACATTGCCTTTTCTGACGAGCACATCAACCACTGCTTCTCCGACGCCCACATGCGCTGGCAAAGCATACACCATTCAAGGTGGAGACGACTGCCATACCATCGCAAAGTCTCAGGGCATTGGCACCATGTGGCTCTTGACCGACAACAACCTGCCAGCTTGGTGTGGCGACTTCCCCACGACGGGAGACCTCTGCCTGGTGAACACCTGCAGCATATACACCGTGCAGCAAAATGACACATGTGACTCAATTGCGTCCGCAAACAGCATATCGACGGTGCAGCTCCAGGCATGGAATCCGTCAATCAACGCAGGATGCAACAACCTGAACAGCAGCGTCGGGTATGAAATCTGCGTCGATGAGCCGGGCCAGAAGTACATCACGCCAAACGAGACCTTCACCGCCACTACTGCGACAACTGCGGCGCCGGTGCCTACAGATGTGGCTGACGGGACCAATACGGATTGCGGACAGTACTACCAGGCCATCCCGGGCGACTACTGCAATCTGATCACAATCAAGTTCGGAATCAGTCTGACCGATTTCGTGTTCTTGAATCCTGGAATCAACGAAAACTGTACCAATCTCTTTGCGTATGAGAGCTACTGCGTTGAGGCGGTAGGAGACATAAACACGTACTCCGGCCGTCCGGGCTATGCCACAGCCACGCCGACATACTCTATGGTCCCCTGGGATAGCTGGCCCGATGCGACTTTCACGGCCAATACGACCACGTCAACCGGCCTGCCTCTGGCTTCCGGCACTCGTGGCGACTGCAACATCTACATGGACGGGGACGACTACCAGTTCCCGGATGCAGCGGTGGACAACACCACGCAATGCGACATTGTGGCGTCTTTCTGGGGCATCAGCGTGACCGATCTGACGTATTGGAATCCGTCACTTAATGCGTCATCTTCCAACTGCAGTTTGTCGAGCGGCCTCAGCTACTGTGCCGTATGGGTCGACATACCCTCGGCTGCAATTCCCACGGCAACCTCTGTACCTATCAGAGACGGGGCGTCGGAGAACTGCACGTTCTACTACGACGTCGAAGCAGGCATAACGTGCCAGAACCTCCTCGACTACACCTGCCTCACGATCGCGCAGCTCTACGCTATGAATCCAGCCGTTGGCGCCGACTGCAGCGGCTACCAATACTGCGTCCGCACGCCCGACTACGTCGACCTGGTCGGCTGCAGCGACGACGACAACTCGACCACCACCACCACAACCGGCACCCTGACCCAGACGCCAACCACCGGCACGCAGACGGGCACCTCGGCCCCAGCCACGACCGTCGCGCCCGGCCCAACGCAGACCGGACAGCCGTCCAACTGCAACGCGTGGTACATCGCGCAGTCGGGCGACTCCTGCGCGTCGGTCGAGAACGCGTACCTGATCAGCGACGCGCAGTTCCTGGCGTGGAACCCGGCGGTGTCGGCCGACTGCTCGACGGGCTTCTGGGCCGGCTACGCGTACTGCGTCGGCACCGTGGACACGCCCGTGTCGACGCCGGCGACCAGCACGACGGCGGCAGCGACGACGACGACGAGCAGCGCGGCGCCGTCGCCGACGCAGGACAACAGCATCGTGAGCAGCTGCAACAGGTACGCGCAGGCGCAGGACGGCGACTACTGCTCGCTGTTCGCGGACGAGAACGCCATCACGGCGGCGCAGCTGTACGCGTGGAACGCGGTGCTCGGCAGCGACGGCAGCGGGTGCGACAGCGAGTTCTGGCTGGGCTACTGGTACTGCGTTGGTGTTGCGGCGTGA
Protein sequence:
MANMQCNPVVFTFKPGNYYNETLLKAACTSDCDSSLASWEAGIFGSCHDVPWTDAYNESAPIETVPNLVRYNYNQTCRMDTGRYCNAVLGTAASSGDGGNSSACDLCAVKALQFAAGSPYYEGPVLQAESVYQKYTSSCGVSNLPMATTTLPFLTSTSTTASPTPTCAGKAYTIQGGDDCHTIAKSQGIGTMWLLTDNNLPAWCGDFPTTGDLCLVNTCSIYTVQQNDTCDSIASANSISTVQLQAWNPSINAGCNNLNSSVGYEICVDEPGQKYITPNETFTATTATTAAPVPTDVADGTNTDCGQYYQAIPGDYCNLITIKFGISLTDFVFLNPGINENCTNLFAYESYCVEAVGDINTYSGRPGYATATPTYSMVPWDSWPDATFTANTTTSTGLPLASGTRGDCNIYMDGDDYQFPDAAVDNTTQCDIVASFWGISVTDLTYWNPSLNASSSNCSLSSGLSYCAVWVDIPSAAIPTATSVPIRDGASENCTFYYDVEAGITCQNLLDYTCLTIAQLYAMNPAVGADCSGYQYCVRTPDYVDLVGCSDDDNSTTTTTTGTLTQTPTTGTQTGTSAPATTVAPGPTQTGQPSNCNAWYIAQSGDSCASVENAYLISDAQFLAWNPAVSADCSTGFWAGYAYCVGTVDTPVSTPATSTTAAATTTTSSAAPSPTQDNSIVSSCNRYAQAQDGDYCSLFADENAITAAQLYAWNAVLGSDGSGCDSEFWLGYWYCVGVAA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
78027.6 740 3.7 -0.115 29.25
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.