Effector profile
| PlantPEAD ID: PlantPEAD08224 | Uniprot ID: M2THB0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 45130 | Pathogen type: Fungi |
| Species: Bipolaris sorokiniana | Strain: strain ND90Pr / ATCC 201652 | Other name: Cochliobolus sativus，Common root rot and spot blotch fungus |
| Gene name: | NCBI Gene ID: KB445638 | |
| Entry name: M2THB0_COCSN | Protein name: LysM domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCCAACATCTACAACGATGACCTCCTATGCTCAGAATGCTTCTTGAAGCTGATGCATGCTCGCATCTCATCAGAGTTTCTGTCCGACGAAGACCACTCCGACTACCTTGTTCAGGAATTTCAGGACATCCAGAATATCTGCCAGACCACCATTGCAGTCAACATAGCGACGAGATCATTACCAAACTACATGGTCGCCTTGACCCCAACGCCATCGTTCATATTCATCAATGTCATGGGCACTACGTCCAACAACAGCATGCATACTTGCAACGACATTGCACGCCAGTACAACGTGTCGACCGGGAGTCTCGTCTATCTCACCCAAAACGAAGCCTGCTAA
Protein sequence:
MANIYNDDLLCSECFLKLMHARISSEFLSDEDHSDYLVQEFQDIQNICQTTIAVNIATRSLPNYMVALTPTPSFIFINVMGTTSNNSMHTCNDIARQYNVSTGSLVYLTQNEAC
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 12841.5 | 114 | 4.38 | -0.036 | 56.94 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG: bsc:COCSADRAFT_156549
PRINTS: