Effector profile
| PlantPEAD ID: PlantPEAD08247 | Uniprot ID: H1VTU5 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 759273 | Pathogen type: Fungi |
| Species: Colletotrichum higginsianum | Strain: strain IMI 349063 | Other name: Crucifer anthracnose fungus |
| Gene name: | NCBI Gene ID: CACQ02006265 | |
| Entry name: H1VTU5_COLHI | Protein name: LysM domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCGCCTCACATCAAGTCTTTGACGGCTCTGGCATTCTTGCCCCTAGCTTTTGGCTTCAACCTCTGGCCCTTGGTTGAAACGGAAGCATTGGCAGAGATCCTACAGATTGCACCTGCTTGTGTTGTGGCATTAAATTCTACCGTTGCCTGCGATCAAGACCTCTTCCAGCGAACCATCAACGTTGACGGGCTCTGGTGGCAAGAGCAAGATGTCACGACGCTGTGCGGAACCGGCTGCCTCACCTCGGCACGCGATTGGCACGCCAATGTCGAAAGCAGCTGTGCCTACGACCTGATGATCCAAGGCGATCGTCTTGTCGAGGCGGACACTCTTTCCGGTCGTTTCCTCGAGGGTCTCGAACTCGCCTGCACTCGCTCGGCATCCAACGAATGGTGCTTCATCGAGCAGCAGGAGTGGACGGGGTCCGACATGGTCACACCAGACTGCGCCGCGAACCCGGCCGATCCGTTTTGCACGAACCCGGGGAACGTGAGCGCCGAGAACCGCCGTATATCGTCCCTCTACGACAACGACCTGCTGTGCTCCGAGTGCTTCCTCAAGCTCTTGTACGCCCGCGTCACGTCCGCGTTCCTCCCTGACGTCGACTACTCGGACTACCTGGTCGGGGAGTTCCAAGACATCCAGGAGGTCTGCCAGACCACCGTCGGCGAGCTGGCCACCAGGGTGCTGCCCAACTACCCCCATACGACGGACGCGGACGTCACTCCCATCAGGACAGAGGTCACGTCTACCGAGACGGACGCCCCGGCGCCGACAACAACCACCTCGGAGCCCGTCCCGACCAAGGCCCCGGTGCCGGACACGGAAGAGGGCTGCGAAGCTGTGGGCTGGCAATGGGTTGACGTCCTCGTCATGGAAGAGTCCACCATTGCGGAGACGGAGCTTGAGTTCTGCAACGAGGTTGCCGAAATCTATGGCGTCGCGACGGGCGATTTGATGTATACGACAAACACCCCCGGCGCATCGATTGCGGAATCCGCATCCAACGCAACCCACATCGTCAACGCGGTTCAGATAGCCACCTGGAACCCGCATATTCTCGGTGCTTGTGATCATCTGGTCAAAGATCAGTACGTCTGCATAGAGTAA
Protein sequence:
MSPHIKSLTALAFLPLAFGFNLWPLVETEALAEILQIAPACVVALNSTVACDQDLFQRTINVDGLWWQEQDVTTLCGTGCLTSARDWHANVESSCAYDLMIQGDRLVEADTLSGRFLEGLELACTRSASNEWCFIEQQEWTGSDMVTPDCAANPADPFCTNPGNVSAENRRISSLYDNDLLCSECFLKLLYARVTSAFLPDVDYSDYLVGEFQDIQEVCQTTVGELATRVLPNYPHTTDADVTPIRTEVTSTETDAPAPTTTTSEPVPTKAPVPDTEEGCEAVGWQWVDVLVMEESTIAETELEFCNEVAEIYGVATGDLMYTTNTPGASIAESASNATHIVNAVQIATWNPHILGACDHLVKDQYVCIE
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 40416.1 | 370 | 4.01 | -0.026 | 47.85 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: