Effector profile
| PlantPEAD ID: PlantPEAD08295 | Uniprot ID: R1GS21 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 310453 | Pathogen type: Fungi |
| Species: Botryosphaeria parva | Strain: strain UCR-NP2 | Other name: Grapevine canker fungus,Neofusicoccum parvum |
| Gene name: | NCBI Gene ID: KB916149 | |
| Entry name: R1GS21_BOTPV | Protein name: Putative necrosis and ethylene inducing peptide 1 protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGACTTTCACTGTTGCCTCTGCTTTCGTTGGCCTCCTGGCCGCAGCCAGCTCCGTCAGCAGTGCTGCCATCCAACGCCGCGCAGTCATTTCCCACGACGCCATCACCCCCTGGCCCGAGAACGTCCCCGGCGATGCCATTGGCAACACGTTGAAGAGATTCGAGCCGTTCCTGCACATCGCCCACGGCTGCCAATCCTACCCTGCCGTCGACGGCGAGGGCAACACCGGCGGCGGCCTCAAGAACACGGGCAGCCCGTCGGGCGGATGCCGTGACCTCTCCAAGGGCCAGACGTACGTGCGGGCCGACTACCACAACGGCAAGTACGGCATCATGTACGCGTGGTACTTCCCCAAGGACTCGCCGTCGTCGTCGCTGGGCCACCGGCACGACTGGGAGCACGTCGTCGTCTGGGTCGACGACCCCACCGCCGCCGAGCCACAGCTGCTGGGCACCGCCGCCTCCGGCCACGGCGGCTACAAGAAGACCGCCACCCCGAACCTGGACGGGACGCGCCCGAAGGTCGAGTACTTCACCAGCTTCCCCACCAACCACGAGCTGCAGTTCACCGACACCCTCGGCCGCGACCTGCCCATGATGTGGTACGACTTCTTCCCGCAGGTGAGCAAGGACGCGCTGGAGACCACGGATTTCGGCAGCGCAATCGTGCCGTTTAAGAACTCGAACTTCTTGGGCAACCTCGCCAAGGCTGAGGTCTGA
Protein sequence:
MTFTVASAFVGLLAAASSVSSAAIQRRAVISHDAITPWPENVPGDAIGNTLKRFEPFLHIAHGCQSYPAVDGEGNTGGGLKNTGSPSGGCRDLSKGQTYVRADYHNGKYGIMYAWYFPKDSPSSSLGHRHDWEHVVVWVDDPTAAEPQLLGTAASGHGGYKKTATPNLDGTRPKVEYFTSFPTNHELQFTDTLGRDLPMMWYDFFPQVSKDALETTDFGSAIVPFKNSNFLGNLAKAEV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 25875.8 | 239 | 5.96 | -0.34 | 32.14 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR008701
Pfam: PF05630
SMART:
KEGG: npa:UCRNP2_4401
PRINTS: