Effector profile
| PlantPEAD ID: PlantPEAD08375 | Uniprot ID: A0A3M8VJX0 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 2486417 | Pathogen type: Bacteria |
| Species: Streptomyces botrytidirepellens | Strain: NEAU-LD23 | Other name: |
| Gene name: | NCBI Gene ID: RIBZ01000322 | |
| Entry name: A0A3M8VJX0_9ACTN | Protein name: Necrosis inducing protein (NPP1) | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCATGCGTTGGGGTCGAAGGGGATGCCGGACGGCTTGGCCTTCTGGAGGTGGGCGGCGAAGTTGCCGTCCTTGAGGCCGAAGGTGGCGCTGCCGAAATTGGCCTGGCTCAGCTTGTCGCGCAGGCCGGCGGGGTAGCCGTTCCAGCCGACCAGGGTGGGGAACTGCCAGGTGCCGTAGTGGTTCTCGGGCGGTTCGTCATTGGTGTTCGCGGGGCGGAACGCGTGGGTGCTCAGCCCGTCCTTGTGGTAGACGATCTTCGGGTGGTTTCCGTCCCAGCGGATCTGGTCGCGGCCGTACGTGGTGAACCCGCCGTGGGCGGAGGTGGAGACGTACTGGGCCTGGTTGTTCTGCACCCACACCACGACGTGCTCCCAGTCGTGGCGGTGTCCGCCGACCGACGCCTGGTCCTTCTCGAAGTAGAGGCCGTACATGACCGCGCACCAGCCGTTGTTGCAGGTGGAGCGCGCGTATCCGTTGGTGTTGTCGAGGTCCGGGGCGTCGCGGCACTGCCCGTTGGGCGCGCCAGAGGGGTTGAGGCCACCGTTCAGCGTGCCGTCGGGGCCGATGGCGGGGGTGGGGTAGCATCCGTCGGTGTCGTAGTCGTAAGCGGGCTGGAACGTCTGCTCCAGCGCCTCCGCGTTGCCGGGCAGGGCCTTCGGCGGGTCCGCGAGAGCGCTTCCGGGTAAGGCGACGACCAGGGCGATGGCGCTGCCGAAGACGAACGAGACCTTGCGGATGCGCGAGCTTCTCTGCAC
Protein sequence:
MQRSSRIRKVSFVFGSAIALVVALPGSALADPPKALPGNAEALEQTFQPAYDYDTDGCYPTPAIGPDGTLNGGLNPSGAPNGQCRDAPDLDNTNGYARSTCNNGWCAVMYGLYFEKDQASVGGHRHDWEHVVVWVQNNQAQYVSTSAHGGFTTYGRDQIRWDGNHPKIVYHKDGLSTHAFRPANTNDEPPENHYGTWQFPTLVGWNGYPAGLRDKLSQANFGSATFGLKDGNFAAHLQKAKPSGIPFDPNA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 27183.9 | 251 | 6.11 | -0.591 | 28.61 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR008701
Pfam: PF05630
SMART:
KEGG:
PRINTS: