Effector profile
| PlantPEAD ID: PlantPEAD08521 | Uniprot ID: A0A0D5CNB6 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 28447 | Pathogen type: Bacteria |
| Species: Clavibacter michiganensis | Strain: subsp. insidiosus strain R1-1 | Other name: |
| Gene name: | NCBI Gene ID: CP011046 | |
| Entry name: A0A0D5CNB6_9MICO | Protein name: Transaldolase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAGCGTCACCATCCCACTCGACGAGCCGATCGAGACCCCGGCTGCATGCCCTCTTCGGCGCGCAGCGGAGGGGAGCGGCACGAGTCTGTGGAACGACTCGGCTGACCCTCGCGAGCTCGCTCAGTCGCGCGAGCTCGCTCAGTCGATCGCGTTCGGAGCCGTGGGCGCCACATGCAACCCCGTGATCGCGCTCACGACCATCGAGAAGAACCTCGACGTCTGGGCTCCGCGCATCGCGGCACTCGCCACCAAGCACCCCACCGCTAGTGAGAGCGAGCTGGGTTGGCTCGCCATCGAGATGATGTCCATCGAGGCTGCGGTACTCCTCCTCCCCGCCTTCCAGGCCAACGGGGGGCGTGACGGGCGGCTGTCGGTGCAGACGGATCCACGGCTCCACCGCAACGCAGAGGCGCTCGTCGAGCAAGCCGTGCGCTTCTCCCAGCTCGCGGAGAACATCATCGTGAAAATCCCCGCGACCGCCGTCGGCATCCGCGCCATCGAGGAAGCGACCTACCGAGGCGTGAGCATCAACGCCACCGTCTCCTTCACGGTCGCACAGGCGGTCGCCGTCGCCGAGGCCATCGAGCGCGGGCTGGACCGCCGCACCGCTGCCGGTCTACAGGAGCAGGAGTTCGGCTCCGTCGTCACGATCATGGGCGGACGGCTGGATGACTGGATCAAGGCCTCCGCGGACGCGGACCGTCAGCTCATCGAGCCCGGATACGCGGACTGGGCAGGGGTCGCGGCTCTCAAGGAGGCCTACCGCATCTTCCAGGAGCGCGGGTACCGATCGCGCGTCCTGTCCGCCGCGTTCCGCAACCACCTCCAGTGGTCCGAGCTCATCGGGGGCGACCTCGTGATCTCGCCGCCATTCGACTGGCAGCTCCGCATCAACGAGAACAACATCGAGGTCGACACGAACCGCATCTCCACCCCTGTCGCTCCGGAGATCCTCGCGGCGCTGCTCGAGCTGCCGGAGTTCCGTCGTGCCTACCGAGAGGACGGGCTCAGCATTGAGGACTTCGACTCCTTCGGTGCTGTCCGTCGGACCCTGCGACAGTTCCTCGATGCCGACGCGCGACTGGACGCCCTGGTTCGAGAGATTCTCCTGCCGACCATCTAA
Protein sequence:
MSVTIPLDEPIETPAACPLRRAAEGSGTSLWNDSADPRELAQSRELAQSIAFGAVGATCNPVIALTTIEKNLDVWAPRIAALATKHPTASESELGWLAIEMMSIEAAVLLLPAFQANGGRDGRLSVQTDPRLHRNAEALVEQAVRFSQLAENIIVKIPATAVGIRAIEEATYRGVSINATVSFTVAQAVAVAEAIERGLDRRTAAGLQEQEFGSVVTIMGGRLDDWIKASADADRQLIEPGYADWAGVAALKEAYRIFQERGYRSRVLSAAFRNHLQWSELIGGDLVISPPFDWQLRINENNIEVDTNRISTPVAPEILAALLELPEFRRAYREDGLSIEDFDSFGAVRRTLRQFLDADARLDALVREILLPTI
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 40864.4 | 374 | 4.83 | -0.029 | 54.64 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013785,IPR001585
Pfam: PF00923
SMART:
KEGG: cmh:VO01_15965
PRINTS: