Effector profile
PlantPEAD ID: PlantPEAD08657 Uniprot ID: E0SE60 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 204038 Pathogen type: Bacteria
Species: Dickeya dadantii Strain: strain 3937 Other name:
Gene name: HrcV NCBI Gene ID: CP002038
Entry name: E0SE60_DICD3 Protein name: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
DOI:
Gene/Protein information
Gene sequence:
ATGGCTGTGCTGATCGCCTGGCTTAACCGTTTTGCCATGAGCGCCATGCAGCGCTCCGAAGTGGTGGGCGCCGTCATCGTCATGGCGATTGTGTTCATGATGATTATCCCGCTGCCGACCGGCCTGATTGACGTGCTGATTGCGTTCAACATCTGTATTTCATCACTGCTGATCGTGCTGGCGATGTACCTGCCCAAACCGCTGGCGTTCTCTACCTTCCCGGCGGTGCTGCTGCTGACCACCATGTTCCGGCTGGCGCTGTCCATCTCCACCACCCGGCAGATTCTGTTGCAACAGGATGCCGGTCACGTGGTGGAGGCGTTCGGCAACTTCGTGGTGGGCGGCAATCTGGCGGTCGGCCTGGTGATCTTCATGATCCTGACGGTGGTGAACTTTCTGGTGATCACCAAAGGGTCGGAGCGGGTGGCGGAAGTGGCGGCGCGTTTCACCCTCGATGCCATGCCCGGCAAACAGATGTCCATCGACAGCGACCTGCGCGCCGGGTTGATCGACGCCCAACAGGCTCGCCAGCGACGGGAAAACCTGGCCAAGGAGAGCCAACTGTTCGGTGCCATGGACGGGGCGATGAAGTTCGTCAAAGGGGATGCCATCGCCAGCCTGGTGATCGTATTCATCAACATGATTGGCGGCTTCGCCATCGGCGTGTTGCAAAACGGCATGGCCGCCGGCGACGCCATGCACATTTACTCGGTGCTGACCATCGGCGACGGCCTGATCGCTCAGATTCCGGCGCTGCTGATTTCGCTGACCGCCGGGATGATCATCACCCGCGTCTCCGCCGACGGCCAGAAAATGGACAACAATATTGGCCGGGAGATCGCCGAGCAGCTGACCAGCCAGCCCAAGGCGTGGATCATCTCGTCGGTGGGCATGTTGGGGTTCGCGCTGCTGCCCGGTATGCCGACGCTGGTGTTTCTGCTAATCAGCCTGGTGTCGCTCGGCAGCGGGTTGTTTCAGCTGTGGCGCGTCAAACAGAGCGGCTTGCAGGATTCGCTGCTGGCGGATGACGGCATGCCCGCTGAACAGAACGGCTATCAGGATCTGCGGCGTTTCAACCCGACCCGCGCCTACCTGCTGCAGTTCCATACCGTGTGGCAGGGCGCCGCGGCGGCCGCGGTGCTGGTACAGGACATCCGTCGCCTGCGCAACCGGCTGGTGTACCACTTCGGCTTTACGCTGCCGTCGTTCGATATCGAATTCAACCCCAGCGTGCCGGAGGATGAGTTCCGCTTCTGCGTGTATGAAATCCCGCAGTTGCGAGCCAGCTTCGGCGTGCCGCTGCTGGCGGTGCCGCGCGGACAACTGCCGGAAGCGATGCAGGACGACGCCATGATGCCCGGCCTGTCGGCCCGCGACGAACACCACCTGCTGTGGCTGACGCCGGAACATCCGCTATTACAGCAGCCGGAACTGAGCCCCTGGAGCCCGGACGCGCTGATCCTCAGTCGCATGGAGAATGCGATTCATCGCAGCGGCGCGCAGTTTATCGGCCTGCAGGAAACCAAATCGATCCTCGCCTGGCTGGAGGCCGAACAGCCGGAGCTGGCGCAGGAGCTACAGCGCATCATGCCGTTATCGCGCTTCGCCAGCGTACTGCAACGGCTGGCGTCGGAGCGGGTGCCGCTGCGTTCGGTGCGGCCGATCGCCGAAGCGCTGATCGAAATCGGTCAGCATGAGCGCGACATCAACGCCCTCACCGACTACGTGCGGCTGGAGCTGAAAGCCCAAATTTGCCACCAGTACAGTCAGGACGACAGCCTCACCGTCTGGCTGCTGACGCCGGAAACCGAAGAGCTGCTGCGCGACGCGCTGCGCCAGACGCAGAACGAAACCTTCTTCGCGCTGACCCAGGAATACGCCGCCACCCTGCTCGGCCTATTGCGGCGCGCATTCCCGCCGATGACGCCGCCGTCGGCGCTGATTCTGGTGGCGCAGGACCTGCGCAGCCCGCTGCGCATTCTGTTGCAGGACGAATTTCATCACGTACCGGTGCTGTCGTTCACCGAACTGGAGTCGCACCTGTCGATCAACGTGGCGGGCCGTATCGACCTGCTGGACCGGGTTGACCCCTTTAACGCATAG
Protein sequence:
MAVLIAWLNRFAMSAMQRSEVVGAVIVMAIVFMMIIPLPTGLIDVLIAFNICISSLLIVLAMYLPKPLAFSTFPAVLLLTTMFRLALSISTTRQILLQQDAGHVVEAFGNFVVGGNLAVGLVIFMILTVVNFLVITKGSERVAEVAARFTLDAMPGKQMSIDSDLRAGLIDAQQARQRRENLAKESQLFGAMDGAMKFVKGDAIASLVIVFINMIGGFAIGVLQNGMAAGDAMHIYSVLTIGDGLIAQIPALLISLTAGMIITRVSADGQKMDNNIGREIAEQLTSQPKAWIISSVGMLGFALLPGMPTLVFLLISLVSLGSGLFQLWRVKQSGLQDSLLADDGMPAEQNGYQDLRRFNPTRAYLLQFHTVWQGAAAAAVLVQDIRRLRNRLVYHFGFTLPSFDIEFNPSVPEDEFRFCVYEIPQLRASFGVPLLAVPRGQLPEAMQDDAMMPGLSARDEHHLLWLTPEHPLLQQPELSPWSPDALILSRMENAIHRSGAQFIGLQETKSILAWLEAEQPELAQELQRIMPLSRFASVLQRLASERVPLRSVRPIAEALIEIGQHERDINALTDYVRLELKAQICHQYSQDDSLTVWLLTPETEELLRDALRQTQNETFFALTQEYAATLLGLLRRAFPPMTPPSALILVAQDLRSPLRILLQDEFHHVPVLSFTELESHLSINVAGRIDLLDRVDPFNA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
77454.5 700 5.36 0.322 54.82
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.