Effector profile
| PlantPEAD ID: PlantPEAD08951 | Uniprot ID: A0A1C7NIM8 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 101091 | Pathogen type: Fungi |
| Species: Choanephora cucurbitarum | Strain: | Other name: |
| Gene name: Crf1_0 | NCBI Gene ID: LUGH01000120 | |
| Entry name: A0A1C7NIM8_9FUNG | Protein name: Putative glycosidase crf1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAACATTCATCGACCTTCTCTTGCTCGTCGTGATAAGCCTGCTTGTATCAGCAAACTCTATGATTTCAGTAAATCAAGATCACTTGAAGATTGGATCTATACCTCTGGCACACATGAAATAAATGATAATGGCGTACAAATGAAACTAATGAAGCCTGAAGGTGTCAAGCGTGAATACATGGTTGAAGATAAAGAAAAACTTCCTATCAATTCAGTTGCTTCTGAAGGCTTTACCTTTAACCACACCGGCACTATGTTGTATGGCAAATTCTCTACTGTTGTTAAATCTGCTCCTGCTCCTGGTGCTATCACTGCTGTCATCTTGTATGCTGAAAACGGCGATGAAATTGATTTTGAATTCCTTGCAGGCAAAAAAGACCAAGTGACTTCCAACTATTTCTATGGTCCTAACATTGTCTATGGTGTTAATGGACAGACAACAGATTGTGCTGAAGGAAATGCTTACGATGACTTTCACAGATATACTATTGAATGGACTAAAGACAAGATTGTTTGGAGTATTGATAACAAGGTTGTTCGTACAACCTACAAGAACAAGACAGAATTGGATCCTAAGCATGGCAATGTTCATCAATATCCTACTCATCCTGCACATATCTCTATTGGCCTCTGGGACGGTAGTTCAGTAGGTGGCACTGCACAATGGGCTCAAGGTCCAATTGATTGGGAGAAGTATCCTCATGGTACATCTGCTTATATCAAATCTGTTGAAATTGAATGCAGTACAGAATAA
Protein sequence:
MNIHRPSLARRDKPACISKLYDFSKSRSLEDWIYTSGTHEINDNGVQMKLMKPEGVKREYMVEDKEKLPINSVASEGFTFNHTGTMLYGKFSTVVKSAPAPGAITAVILYAENGDEIDFEFLAGKKDQVTSNYFYGPNIVYGVNGQTTDCAEGNAYDDFHRYTIEWTKDKIVWSIDNKVVRTTYKNKTELDPKHGNVHQYPTHPAHISIGLWDGSSVGGTAQWAQGPIDWEKYPHGTSAYIKSVEIECSTE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 28244.6 | 251 | 5.85 | -0.6 | 36.41 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013320,IPR000757
Pfam: PF00722
SMART:
KEGG:
PRINTS: