Effector profile
| PlantPEAD ID: PlantPEAD09174 | Uniprot ID: R1GCV4 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 310453 | Pathogen type: Fungi |
| Species: Botryosphaeria parva | Strain: strain UCR-NP2 | Other name: Grapevine canker fungus,Neofusicoccum parvum |
| Gene name: | NCBI Gene ID: KB916504 | |
| Entry name: R1GCV4_BOTPV | Protein name: Putative extracellular cell wall glucanase crf1 allergen asp f9 protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCGCTGACTCCTACAGCGTCCTGTCCGACCGATACCGCCCTCTCGTCGGGCTCCTACACCGTCGACTTCACCCAAGGTGAAAACGATCAGTGGACCACCACCGCCGGGACCGTCAACTACGGTAGCGATGGCGCCGAGTTTACAATCAAACAATCCGGCGACGCACCCACCATCGAGACCTCCTTTTATTTCCTCTTCGGCCAGATAGAGGTTCTCCTGCGTTCCGCTCCTGGAACCGGCATCGTCAGCAGCGTCGTGCTGGAGTCGGACGACCTGGACGAGATCGACTGGGAATGGCTGGGCGGAAACAGCGCCCAGGTCGAGAGCAACTACTTCGGCAAAGGCAACACCACCAGCTACGACCGCGCTGTCTACCACTCGGTGGCACCAGACACTCAGGCCAATGTCCACAACTACACCGTGCTATGGACCTCCGAGTACACAACCTGGTTCATCGACAGCGTTGCCGTCCGCACTCTCAACTATGCTGATGCTGTTGGTGGCACCAACTACCCGCAGACACCCATGAAGTTGAAGCTCGGCATTTGGGCTGGCGGCGACAGCAACAACGACGCCGGCACTATTGGCTGGGCGGGTGGCACCACTGACTACTCGGATGGCCCCTTCACCTTCTACGTCCAGAGCGTCTCCATCGTCAACTACTCGCCGGCAACGAGTTACAAGCCGTACACCTCGTCAATTGCCACTATGTAA
Protein sequence:
MSLTPTASCPTDTALSSGSYTVDFTQGENDQWTTTAGTVNYGSDGAEFTIKQSGDAPTIETSFYFLFGQIEVLLRSAPGTGIVSSVVLESDDLDEIDWEWLGGNSAQVESNYFGKGNTTSYDRAVYHSVAPDTQANVHNYTVLWTSEYTTWFIDSVAVRTLNYADAVGGTNYPQTPMKLKLGIWAGGDSNNDAGTIGWAGGTTDYSDGPFTFYVQSVSIVNYSPATSYKPYTSSIATM
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 25622.8 | 238 | 3.99 | -0.278 | 31.27 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013320,IPR000757
Pfam: PF00722
SMART:
KEGG: npa:UCRNP2_7266
PRINTS: