Effector profile
| PlantPEAD ID: PlantPEAD09508 | Uniprot ID: A0A066XP27 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1173701 | Pathogen type: Fungi |
| Species: Colletotrichum sublineola | Strain: TX430BB | Other name: Sorghum anthracnose fungus |
| Gene name: | NCBI Gene ID: JMSE01000514 | |
| Entry name: A0A066XP27_COLSU | Protein name: chitinase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCCCCTTATAACAGTTTGCTCACATCCTCGCCGATCCGTCTCCGCTCGATTCAATCCTCATAGACTCTCTGCTGGTGACTTGTCTCCAAGGCATGCGAGCAAGATGGCGAACTACAGGGCTCTTCTCCCTTACTTCGTCTGGGTCTTTGTCCTGGGTCTAGCTGGCCTCATCCACGCTCAGGATACTCCAACATGCAACGCTAAATCGACTTGTGTCAATAACTGTGATCGTAAGGCCGAGTGCGATCCGGGCGGCTACGGCGAAGACTATGTGGTGAAAACCACATGCCCCCTCAATGTCTGCTGCTCCAAATATGGCTTTTGCGGAACAACCGAGAAGTACTGTGGCACCAAGGAGGTTGACCGGCCTAGCTGCCCCGTCGAAGAGAGCAGCAGTTTCAAGCGCGTCGTTGGATACTATGAAACCTGGGCGATGGAGCGAGCATGCAATCGGTTCTCCCCAGAACAGATTCCCGCCGGCGTCTACTCGCACATCAACCTCGCCTTTGCTAGTATCAACCCGTCGACCTTCGAGTTAGTGCCAGCCGAAAAAAGTGACGTCGATCTGTACCAGCGCGTAGTGAACCTCAAGGCTGCGGACCCGCATCTCAAAGTCTTCGTCGCCGTCGGAGGCACGGATTTCCACGACACAGGGGCGACGGCGGGTACATTTTCTGACATGGCGAGAAGCGGAGAGGCGCAGAGCAAGTTCATCGACTCGGTTCTCAAGTTTATGTCTACCCACAATTTGGATGGGATCGACTTGGACTGGGAGTACCCTGCGGCCAAGGACCGCGGTGGACGAGATGAAGACTTCGCCAATTTGCCCAAGTTAATGAAGGCGCTGAGACAAGGACTCAAGGATTACGAGATCAGTGTCACGCTCCCAGCTATCTACCGGAATCTTCAGCACTTTGACCTCAAGAACATTGAGCCGCATGTGGACTTTTTCAACGTGATGGCATACGACTTCCATGGCGCCTGGGAACAGCCCACCGAGTCGGGCGGGCCGTACCTCAACTCGCACACCAACCTCACAGCAGCCAAACAAGGGCTCGACCTGCTCTGGCGTAACAACGTCAATCCCGATAAGGTGGTCCTGGGCCTCGCGTTCTACGGCCGCGGCTTCCGGGCCTCCAGCTCTTCCTGTCTCCGCCCGGGATGTACATTTGACTCCGGCAGCGAAGCCCAACCGTGCAGTGGGGAGGTCGGCTCTGTGTTGAACTCGGAGGTCGACGACCTCGTCGCCTGGCACGGCGCGAAAACTACTCTCGACAAGGACGCCGCGGTCAAGATCGTCACGTGGAGAGACAACAACTGGCTCACGTATGACGACGAGGAGTCGCTCCGGTTGAAGACAGATTTCGCGCGCGGCCAATGCCTCGGAGGTGTCATGGTGTGGGCGATCTCGCAAGACACAGAGAACGCGAAATATTCGATGGCTCTCTCACGCGTCGCCCCAAGGTTCTCCAGCTCTTAG
Protein sequence:
MPLITVCSHPRRSVSARFNPHRLSAGDLSPRHASKMANYRALLPYFVWVFVLGLAGLIHAQDTPTCNAKSTCVNNCDRKAECDPGGYGEDYVVKTTCPLNVCCSKYGFCGTTEKYCGTKEVDRPSCPVEESSSFKRVVGYYETWAMERACNRFSPEQIPAGVYSHINLAFASINPSTFELVPAEKSDVDLYQRVVNLKAADPHLKVFVAVGGTDFHDTGATAGTFSDMARSGEAQSKFIDSVLKFMSTHNLDGIDLDWEYPAAKDRGGRDEDFANLPKLMKALRQGLKDYEISVTLPAIYRNLQHFDLKNIEPHVDFFNVMAYDFHGAWEQPTESGGPYLNSHTNLTAAKQGLDLLWRNNVNPDKVVLGLAFYGRGFRASSSSCLRPGCTFDSGSEAQPCSGEVGSVLNSEVDDLVAWHGAKTTLDKDAAVKIVTWRDNNWLTYDDEESLRLKTDFARGQCLGGVMVWAISQDTENAKYSMALSRVAPRFSSS
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 54503.3 | 493 | 5.93 | -0.329 | 41.43 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001002,IPR018371,IPR011583,IPR029070,IPR036861,IPR001223,IPR001579,IPR017853
Pfam: PF00187,PF00704
SMART: SM00270,SM00636
KEGG:
PRINTS: