Effector profile
| PlantPEAD ID: PlantPEAD09536 | Uniprot ID: H1V2I0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 759273 | Pathogen type: Fungi |
| Species: Colletotrichum higginsianum | Strain: strain IMI 349063 | Other name: Crucifer anthracnose fungus |
| Gene name: | NCBI Gene ID: CACQ02001138 | |
| Entry name: H1V2I0_COLHI | Protein name: chitinase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAAGGACATACCCGTCAACTCGCTGACTCACCTGTACTTTTCCTTTGCATTCATCACCCCCAACGAGTACAACATTGTCGGGATGGACGGTCTGCCCTCGGAGCTCTTCAGCAACTTCACCGACCTGAAGAAGGATAATCCGAGTCTGAAAATGACCATTGCCATCGGAGGATGGACACACAACGACCCAGGCCCTCTTCAGAAGGTGTTTAGCGACATGGTCAGCACGAAGCAGAACCGATCGACGTTCATTGAGAACTTAATGGCCTTCCTTCGTCAATATGCGTTTGATGGTGTTGACTTTGACTGGGAATGCCCCGGTGCTGACGACAGAGGTGGCGTGCCCGAAGATGGCGTCAACTTTACCCAATTCCTGAAAGAGCTCGAAGAAGAAAACAAGAAGCAGCCGAAAAGGTACATTGTATCTTATACTGCGCCAACGAGCTTCTGGTATCTGCGCCACTTTGATCTGAAGTCGATCGACTATGTCGACTTTGCCATTGTCATGTCCTATGATCTGCACGGAGTCTAA
Protein sequence:
MKDIPVNSLTHLYFSFAFITPNEYNIVGMDGLPSELFSNFTDLKKDNPSLKMTIAIGGWTHNDPGPLQKVFSDMVSTKQNRSTFIENLMAFLRQYAFDGVDFDWECPGADDRGGVPEDGVNFTQFLKELEEENKKQPKRYIVSYTAPTSFWYLRHFDLKSIDYVDFAIVMSYDLHGV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20350 | 177 | 4.8 | -0.338 | 46.26 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR011583,IPR001223,IPR001579,IPR017853
Pfam: PF00704
SMART: SM00636
KEGG:
PRINTS: