Effector profile
| PlantPEAD ID: PlantPEAD09627 | Uniprot ID: A0A163GPB8 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 5454 | Pathogen type: Fungi |
| Species: Ascochyta rabiei | Strain: | Other name: Didymella rabiei，Mycosphaerella rabiei |
| Gene name: | NCBI Gene ID: JYNV01000148 | |
| Entry name: A0A163GPB8_DIDRA | Protein name: Endo-1,4-beta-xylanase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGTGGCTTTCTCCCACATTGCTGTTGCTCTGTCGGCAGTTGTTGGCTCGTTCGCTGCTCCGACTGCCAACGCAGTTGAGGATCTTCCCGACTTTGAGCTCACCAATGTCGCCAGCCTCGTGCGTCGCCAGGACTACAACCAGAATTACACGACCAGCGGCAATGTGAACTTCAGCCCAAACAGCAGTGGCTACTCTGTTTCCTTCTCCAACGCTGGCGACTTCGTCGTTGGAAAGGGATGGTCAAAGGGAACCACCAGGGAAATCAACTTCAGTGGCTCCACGAGCGCGACTGCAGGTACCGTGCTTGTTTCTGTTTATGGCTGGACCCAGAACCCACTGGTCGAGTACTATATTCAAGAGTACACCAGTAACGGGGCCGGCTCAGCGCAGGGAACGAAGGTCGGATCCGTCACATGCGATGGCTCTGTCTACGACATCTGGAAGCACACTCAAGTTAACCAGCCGTCCATTGTCGGTACGACCACCTTTACACAGTACATCAGCAACAGGCAGAACAAGAGGCCTGGTAGCGGAACCGTCACGACCAAGTGCCACTTCGACGCTTGGGCTAAGCTTGGTCTGAACCTGGGAACGCACAACTATCAGACTCTCTCAACTGAGGGTTGGGGCAACGCTGGCGGAAACTCAAATTACACATTAACGGGCTCTTGA
Protein sequence:
MVAFSHIAVALSAVVGSFAAPTANAVEDLPDFELTNVASLVRRQDYNQNYTTSGNVNFSPNSSGYSVSFSNAGDFVVGKGWSKGTTREINFSGSTSATAGTVLVSVYGWTQNPLVEYYIQEYTSNGAGSAQGTKVGSVTCDGSVYDIWKHTQVNQPSIVGTTTFTQYISNRQNKRPGSGTVTTKCHFDAWAKLGLNLGTHNYQTLSTEGWGNAGGNSNYTLTGS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23778 | 224 | 6.4 | -0.3 | 18.34 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013320,IPR013319,IPR033123,IPR001137
Pfam: PF00457
SMART:
KEGG:
PRINTS: PR00911