Effector profile
| PlantPEAD ID: PlantPEAD09659 | Uniprot ID: Q00350 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 5017 | Pathogen type: Fungi |
| Species: Cochliobolus carbonum | Strain: SB111 | Other name: Maize leaf spot fungus,Bipolaris zeicola |
| Gene name: XYL2 | NCBI Gene ID: U58915 | |
| Entry name: Q00350_COCCA | Protein name: Endo-1,4-beta-xylanase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CCCGGGTAGAGCGATGTTCTTTTAATTATGTTATGCAGATTTACGCAAGGGCTACAGATCTTTTTGATCACCCCGTCGTGGCCGTTGCTACCGAAACTGGATGCCGATCGGTGCATGTCCCCTATGTGTCTCGACTTGGTCATTGTGGCCGCCGCTTAGGGTGAGCTTGTCGAAGTGAGAGGCCTTAACCTACCACCAATGTGTACACCATCACGAATAGAGACAGCACGCGAGATGAGACCTCATGACCACCAGTGTCATTTCATCCTGCGATTCAGGCTCAACTATTACTCGGCGTAGAGATATAAGTCGATAGCTGCTCCCAGTCAGTAGCATCACTGCATCCAACACAGATCAGCAACACTCAACACAAGATGGTTTCCTTCAAGTCTCTGCTTCTCGCCGCTGTGGCTACCACCAGCGTCCTCGCTGCTCCCTTCGATTTCCTTCGTGAGCGCGACGATGTCAACGCGACTGCTCTCCTTGAGAAGCGTCAGTCTACTCCCAGCGCCGAGGGATACCACAATGGATACTTCTACTCGTGGTGGACTGATGGCGGTGGCTCTGCCCAGTACACTATGGGTGAGGGCAGCAGGTACTCTGTGACCTGGAGGAACACTGGCAACTTTGTTGGTGGAAAGGGGTGGAACCCTGGAAGCGGCCGGTAGGTTGCGAAGACTGTTTGGTGATGAGAATCTTACTAATGTGGATTCGTAGTGTCATCAACTACGGCGGAGCCTTCAACCCCCAGGGCAACGGATACCTCGCTGTGTACGGATGGACCCGCAACCCGCTTGTCGAGTACTACGTGATTGAATCCTACGGAACCTACAACCCCAGCAGTGGAGCCCAAATCAAGGGCAGCTTCCAGACCGACGGTGGTACTTACAACGTTGCCGTCTCCACCCGTTACAACCAGCCCTCCATTGACGGAACAAGGACCTTTCAGCAGTACTGGTAAGTCATTTCGGTGTTTAATCAGACAGAAGCGTAGATGTTGACTGTTATGATAGGTCTGTCCGCACCCAGAAGCGTGTCGGTGGAAGCGTGAACATGCAGAACCACTTCAACGCTTGGTCTCGCTATGGCTTGAACCTTGGTCAACACTACTACCAGATCGTCGCCACTGAGGGTTACCAGTCCTCTGGAAGCTCTGACATCTATGTGCAGACTCAGTAGAGTAGTTGTTGTCTGTGAAGCGAGCAACTAGTAGACGAGATTAGACAAGAATAGTGTCTCGGATAGTTGTAAGCAGGTTGGAGAAAGAGCGATGTGTTCGATTTCCTGTACATAGAAACATGTCAATTCACTCGCTATAAAACCTTCCGTCCTCGAATGTGTTCTCTTTTGTATTAGCTGAGCATTGTATCGTGGTTCGGCAAAAGCAGGTAAAGTTTAGGTGAGGGCATTTGTTATAAACAGTCATAGTCTCGTAGCCATCGAATGCTGGTGTGTGAATTC
Protein sequence:
MVSFKSLLLAAVATTSVLAAPFDFLRERDDVNATALLEKRQSTPSAEGYHNGYFYSWWTDGGGSAQYTMGEGSRYSVTWRNTGNFVGGKGWNPGSGRVINYGGAFNPQGNGYLAVYGWTRNPLVEYYVIESYGTYNPSSGAQIKGSFQTDGGTYNVAVSTRYNQPSIDGTRTFQQYWSVRTQKRVGGSVNMQNHFNAWSRYGLNLGQHYYQIVATEGYQSSGSSDIYVQTQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 25576 | 231 | 8.94 | -0.558 | 26.12 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013320,IPR013319,IPR018208,IPR033119,IPR033123,IPR001137
Pfam: PF00457
SMART:
KEGG:
PRINTS: PR00911