Effector profile
| PlantPEAD ID: PlantPEAD10559 | Uniprot ID: A0A7J6J375 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 474922 | Pathogen type: Fungi |
| Species: Colletotrichum gloeosporioides | Strain: strain Nara gc5 | Other name: |
| Gene name: RGGB | NCBI Gene ID: ANPB02000004 | |
| Entry name: A0A7J6J375_COLFN | Protein name: RGG repeats nuclear RNA binding protein B | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCGGTCGCAAGCAAGAACCTGTTCGAGCTCCTCGGCAACGATGCCGAGGATGACACCCCTCAGGCGCCCGTGAAGACGGTCGATAAGTCCACCATGCGCTCTACCAAGCGCAACGCCGAGCCTGAGGCCCCCTCGCGCGCCGCCGCTAACACCGGTGCTCGCCGCAACAACGCCTCTGGCAACGAGGCCGCTTTCCGTGACCGTGGTGCCGGCAGCGACCGCAACCGTGGTAAGACCACCGAGGAGTCTGCTAGAGGCGGCTCCCGTGGCGGCTACGGTGCCCGCGTCCGTGGAGGTCGCGGCGGCCGTTTCCCCCGTGAGCGCGACGACCGACACACCAAGGGCCAGGCCACCGGCGGTTCCGACAAGCAGGCTGCCCAGTCCTGGGGTGCCACCGAGGGTGATGCCGAGCGCAAGGATGAGCAGGCCGGCGAGGCCATCGCTCAGGCCGAGGCGAAGGATGCCGAGGCCGAGGCTGCCGCCCCCGCTGAGCCCGAGGAGCCCGAGGACAAGAACATCTCCTACGCCGACTACCTCGCCCAGCAGGCCGAGAAGAAGCTCGCTCTTGACTCTGGCCTCGAGGTCCGCAAGGCCAACGAGGGCTCCAAGCTCAAGAAGGAGTGGGCCAACGTCAAGGAGGTCTCCCGCGACGAGGAGGACAACTTCATGATCGGCACCGGAGGCAAGACCAAGCGTGAGCGTGAGCGCAAGACCAAGCAGCTCCTGGATATTGACCAGCGCTACGTCGAGCCTGAGCGCCCCCGTGGCGGCCGTGGCGGTCCTCGCGGTGGTGCCCGCGGTGGTGCCCGTGGCGGTGACCGTGGCGAGCGCGGCGGCCAGCGTGGTGGTGCCCCCCGTGGTGCTCCCCGCGGCGGTGCTCCCCGTGGCGGTGCCCCCCGCGGCGGCTCTGCTGCCATCAACACCAAGGACGAGTCTGCTTTCCCCAGCCTCGGCGGCAAATAA
Protein sequence:
MSVASKNLFELLGNDAEDDTPQAPVKTVDKSTMRSTKRNAEPEAPSRAAANTGARRNNASGNEAAFRDRGAGSDRNRGKTTEESARGGSRGGYGARVRGGRGGRFPRERDDRHTKGQATGGSDKQAAQSWGATEGDAERKDEQAGEAIAQAEAKDAEAEAAAPAEPEEPEDKNISYADYLAQQAEKKLALDSGLEVRKANEGSKLKKEWANVKEVSRDEEDNFMIGTGGKTKRERERKTKQLLDIDQRYVEPERPRGGRGGPRGGARGGARGGDRGERGGQRGGAPRGAPRGGAPRGGAPRGGSAAINTKDESAFPSLGGK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 33896.8 | 321 | 9.53 | -1.277 | 34.61 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR039764,IPR006861,IPR019084
Pfam: PF09598
SMART: SM01233
KEGG:
PRINTS: