Effector profile
| PlantPEAD ID: PlantPEAD10839 | Uniprot ID: A0A225C6Y2 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 28447 | Pathogen type: Bacteria |
| Species: Clavibacter michiganensis | Strain: subsp. tessellarius strain ATCC 33566 | Other name: |
| Gene name: | NCBI Gene ID: MZMQ01000001 | |
| Entry name: A0A225C6Y2_9MICO | Protein name: Cysteine hydrolase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CTAGAGCCGCACGGCGTCGTGCGCCTCGACCGTCGACGTGATGCCCGGGTATCGGAGCGTCCGGAAGTACAGGTCGGTGTGCGCGATGATCTGCTCCGCGCCGATCGCGACGCCCTCGTGCCGGGCGTCGGCCGTCGTGTGCGCGTCGCCGACGAGCGTCACGTCGAACCCCCGCGCCGCGGCGCTCTGCAGCGTCGTGCGGACGCAGTAGTCGGTCTGCGCGCCCGCCACGACGATCCGCGTGGTCCCGAGCCGCGCGAGCACCTCGACGAGGTTGGTGCCTGCGAAGGAGTCGCGGTGGGCCTTGCGCACCAGCGCCTCGCCGGGCGTGCGCGCGAGCGGCGGCACGAGCGCCCAGTCAGGGTCGCCCTCCGCGAAGCCGTGGTGGTCCTGGATCCAGACCACCGGCGCCCCGGCGGCGCGGGCGCGCGCAACGAGCGCGGCCGTGCGGGCCACCACGCCGTCGGAGTCGCGGCAGCCGGGCAGTACGCCGGCCTGGAGGTCGATCACGAGCAGGGCGGTGGTGGAAGCCAT
Protein sequence:
MASTTALLVIDLQAGVLPGCRDSDGVVARTAALVARARAAGAPVVWIQDHHGFAEGDPDWALVPPLARTPGEALVRKAHRDSFAGTNLVEVLARLGTTRIVVAGAQTDYCVRTTLQSAAARGFDVTLVGDAHTTADARHEGVAIGAEQIIAHTDLYFRTLRYPGITSTVEAHDAVRL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18642.1 | 177 | 6.13 | 0.146 | 18.14 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR000868,IPR036380
Pfam: PF00857
SMART:
KEGG:
PRINTS: