Effector profile
| PlantPEAD ID: PlantPEAD10841 | Uniprot ID: A0A251XY57 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 28447 | Pathogen type: Bacteria |
| Species: Clavibacter michiganensis | Strain: CASJ009 | Other name: |
| Gene name: | NCBI Gene ID: MDHJ01000001 | |
| Entry name: A0A251XY57_9MICO | Protein name: Nicotinamidase/pyrazinamidase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGACCGCACCCCGCCGTGCCCTCGTCCTCGTCGACGTCCAGCAGGAGTACTTCGCCGGGCCGCTCGAGGTCCGCCACCCCGACCGCGACGACTCGGTGCGCACCATCGGCCGCGCCATCGACGCGGCGACGGAGGCGGGCATCCCCGTCATCGTGGTCCAGCACACCGCCGGCGAGGGCGCGCCCGTGTTCGACCCGACGAGCGACGCCTACCGCCTGCACCCGGAGATCGAGTCGCGCCGGACGGATGCCTGGAAGGGCCTCGTGAAGTCGAAGGGCTCGGTCTTCGCCGGCACCGACCTCGCCGAGTGGCTGCGGGCCGAGGGGCTCGACACGATCACCCTGGTCGGCTACATGACCAACAACTGCATCCTCGCGTCGTCGGTGGAGGCGGAGGGGCTCGATGTCGCGGCCGAGGTGCTCTCCGACGCGACGGGCGCCATCGCCCTCGCCAACGCCGCCGGATCCGCCGACGCGGCGACCGTGCACGGCACGCTCATGACGCTGCTGCACTCCAACTTCGCGGCCGTCGCGACGACCGACGCGTGGATCGCCGCGGTCACCGCCGGCGAGCCCCTCCCGAAGGACGACCTGGGCAGCTCGGCCGTCGCGGGTGCGGCGCGCTCCGCGGGCTGA
Protein sequence:
MTAPRRALVLVDVQQEYFAGPLEVRHPDRDDSVRTIGRAIDAATEAGIPVIVVQHTAGEGAPVFDPTSDAYRLHPEIESRRTDAWKGLVKSKGSVFAGTDLAEWLRAEGLDTITLVGYMTNNCILASSVEAEGLDVAAEVLSDATGAIALANAAGSADAATVHGTLMTLLHSNFAAVATTDAWIAAVTAGEPLPKDDLGSSAVAGAARSAG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 21762.4 | 211 | 4.63 | 0.115 | 26.33 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR000868,IPR036380
Pfam: PF00857
SMART:
KEGG:
PRINTS: