Effector profile
| PlantPEAD ID: PlantPEAD10857 | Uniprot ID: A0A399TD09 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 2301718 | Pathogen type: Bacteria |
| Species: Clavibacter lycopersici | Strain: CFBP 8615 | Other name: |
| Gene name: | NCBI Gene ID: QWGT01000023 | |
| Entry name: A0A399TD09_9MICO | Protein name: Isochorismatase family protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGACCGCACCCCGCCGCGCCCTCGTCCTCGTCGACGTCCAGCAGGAGTACTTCGCCGGACCGCTCGAGATCCGCCACCCGGATCCGGCCGGGTCCGTGCGCGTGATCGCCCGCGCCATCGACGCGGCGACGGCGGCGGGGATCCCGATCGTCGTCGTGCAGCACACCGCCGGCGAGGGCGCGCCCGTCTTCGACCCGACGAGCGACGCGTACCGCCTGCACCCTGAGATCGAGTCCCGCCGCACGGACGCCTGGAAGGGGCTCGTGAAGTCGAAGGGCTCGGTCTTCGCCGGGACCGACCTCGTCGACTGGCTGCGCGCGGAGGGCCTCGACGCGATCACGCTGGTCGGCTACATGACCAACAACTGCATCCTCGCGTCGTCGGTGGAGGCGGAGGGGCTCGACATCGCGGCCGAGGTCCTGTCCGACGCGACCGGGGCGATCGCCCTCGCCAACGCCGCGGGATCCGTCGACGCGGCGACCGTGCACGGCACGCTCATGACGCTGCTGCACTCCAACTTCGCCGCCGTGGCGACGACCGAGGCGTGGATCGAGGCGGTCGCCGCCGGCGAGGCGCTCCCGAAGGACGACCTCGGCAGCTCCGCCGTCGCGGGCGCGGCGCGCTCCGCGGGCTGA
Protein sequence:
MTAPRRALVLVDVQQEYFAGPLEIRHPDPAGSVRVIARAIDAATAAGIPIVVVQHTAGEGAPVFDPTSDAYRLHPEIESRRTDAWKGLVKSKGSVFAGTDLVDWLRAEGLDAITLVGYMTNNCILASSVEAEGLDIAAEVLSDATGAIALANAAGSVDAATVHGTLMTLLHSNFAAVATTEAWIEAVAAGEALPKDDLGSSAVAGAARSAG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 21611.4 | 211 | 4.67 | 0.267 | 28.66 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR000868,IPR036380
Pfam: PF00857
SMART:
KEGG:
PRINTS: