Effector profile
| PlantPEAD ID: PlantPEAD10936 | Uniprot ID: B9J7N9 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 359 | Pathogen type: Bacteria |
| Species: Rhizobium rhizogenes | Strain: strain K84 / ATCC BAA-868 | Other name: Agrobacterium radiobacter |
| Gene name: | NCBI Gene ID: CP000628 | |
| Entry name: B9J7N9_RHIR8 | Protein name: Isochorismatase protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCCTCCGCATTGCTCCTGATCGATCTCCAGAACGCCGTCCTGACCGGCCTTGGCACGCCAGCGCGCCAGCCGGCAATCGATGCCGCCCTTGAGACGGTCGTCTCCAAGCTTGCGGCTTTGAAGCGCGTGGCGCGTGCCGCCGGCATTCCGTCCTTCATCGTCCAGCATGACGGCCATGGAGCTCATCGCCTGGCCAAGCGCGGCGAGGGCTGGCAGCTGCGGCGGGAAATCGCTCCGGAGGCGGGCGATGTTGTGGTCCACAAGACGAGTTGCGATTCTTTTTTCGGGACCGACCTTGAGCAGCGCCTGCGTGCCAAGGGGATCACCCGCCTCATCATCGGCGGCTGCATGACCCAATTCTGCGTCGACACCACGGCCCGGCGTGCGGTCTCGCTCGGCTTCGACGTAACGCTGATCAGCGACGGCCATACGACCGCCGATATGGGCAAGCTATCGTTCGAGGCGATTGTCTCTCATCACAATATGCTGCTTGACGGCTTTGATGCCGGGCCGCATGAAATCAAGCTCGTCCCGACAGCTCAAATCGCCTTCTGA
Protein sequence:
MSSALLLIDLQNAVLTGLGTPARQPAIDAALETVVSKLAALKRVARAAGIPSFIVQHDGHGAHRLAKRGEGWQLRREIAPEAGDVVVHKTSCDSFFGTDLEQRLRAKGITRLIIGGCMTQFCVDTTARRAVSLGFDVTLISDGHTTADMGKLSFEAIVSHHNMLLDGFDAGPHEIKLVPTAQIAF
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19776.8 | 185 | 7.09 | 0.131 | 35.85 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR000868,IPR036380
Pfam: PF00857
SMART:
KEGG: ara:Arad_0554
PRINTS: