Effector profile
| PlantPEAD ID: PlantPEAD11050 | Uniprot ID: F0QD80 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 80867 | Pathogen type: Bacteria |
| Species: Paracidovorax avenae | Strain: strain ATCC 19860 / DSM 7227 / CCUG 15838 / JCM 20985 / LMG 2117 / NCPPB 1011 | Other name: Acidovorax avenae |
| Gene name: | NCBI Gene ID: CP002521 | |
| Entry name: F0QD80_PARA1 | Protein name: Isochorismatase hydrolase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCTGCTTGATGCCCTCGAATCCCAACTCGTGCTGGTGGACTACCAGGAACGCCTGATGCCCGCCATCTCCGACGGCCCGTCCGTGCTGGCCAATGCGCGGCTGCTGGCGCAGGTGGCCGGTGCGCTCGACGTGCCCGTGTGGGGCACCGAGCAGAATCCTTCCCGGCTGGGCCCGAACGAAGCCGCGCTGCGGGCGCTCTGCCGCAGGACGCTGGCCAAGATGCAGTTCAGCGCTGCGGAAGAAGGCCTGGGCGAATGGCTGCGTCCGCCGGCCAGGCCGCAGCAGGGCGGCAACGCCCGCAGCCTGCCGCGCCACCTGCAAAAGCCCGCCCAGCCGCAGGCCGCGGCCGATGCGCGCGGCAGCATCGTGATCGCCGGCTGCGAGGCGCATGTGTGCCTGCTGCAGACGGCGCTGGACCTGCTCGAGGACGAGTTCGAGGTCTGGGTGGTGACCGACGCGTGCGGCTCGCGCACCGAGCGCAACCGTGATGCCGCGTTCGACCGGCTGGCGGGGGCGGGGGCGGAGCTGGTCACCACAGAAATGGTGGCGTTCGAATGGCTGCGGGGCTGCGAACACCCGGCATTCAAGGAAGTGCTTGCATTGGTGAAATAG
Protein sequence:
MLLDALESQLVLVDYQERLMPAISDGPSVLANARLLAQVAGALDVPVWGTEQNPSRLGPNEAALRALCRRTLAKMQFSAAEEGLGEWLRPPARPQQGGNARSLPRHLQKPAQPQAAADARGSIVIAGCEAHVCLLQTALDLLEDEFEVWVVTDACGSRTERNRDAAFDRLAGAGAELVTTEMVAFEWLRGCEHPAFKEVLALVK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 22089.3 | 204 | 5.05 | -0.069 | 45.66 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR000868,IPR036380
Pfam: PF00857
SMART:
KEGG: aaa:Acav_2413
PRINTS: