Effector profile
| PlantPEAD ID: PlantPEAD11233 | Uniprot ID: A0A4R8RRN0 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 5466 | Pathogen type: Fungi |
| Species: Colletotrichum trifolii | Strain: 543-2 | Other name: |
| Gene name: RNF1-0 | NCBI Gene ID: RYZW01000013 | |
| Entry name: A0A4R8RRN0_COLTR | Protein name: Guanyl-specific ribonuclease F1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATCAGCCTCAAATCCACGCTCCTCCTGGCCCTCTGCGCCTTCGCGACAGCGTCGCCACTGTCCGAACAGACCCTCCAACGTCGCCAGGGCTCCTCCGACAACATCCAGCCCGTCGACTGCGGCGGCGAGCGCTACTCCCGCAGACAGCTCGAAGAGGCCACGGCCGAGGGCTGCCGCCTCTACGCCAACAGTCTGCAGGTCGGCACCAGCCAGTACCCGCACCGCTTCAACAACCGCGAGGGCCTCATCTTCGCCTCCACCGGCCCTTTCCAGGAGTTTCCCATCATACCGTCCGGGAACTATTCAGGCAGGGCTCCCGGACCAGATCGCGTCGTCTTCGACCCCGACTACCGGGGCCGCTGCAGCTACGTCGGCGCAATGACCCACACCGGCGCTGACCAGCGCAACGGCTTCGTGACGTGCAACGAGACGCGGAGGGGCGGCAGCGGTTCTTCGGCCGCCGTGAGCATTTCGCCGTCCGGACCCCTCGGCGTGCTGCTGCCTCTGCTGTCTTTCATGGCCTTCATCGCGTAG
Protein sequence:
MISLKSTLLLALCAFATASPLSEQTLQRRQGSSDNIQPVDCGGERYSRRQLEEATAEGCRLYANSLQVGTSQYPHRFNNREGLIFASTGPFQEFPIIPSGNYSGRAPGPDRVVFDPDYRGRCSYVGAMTHTGADQRNGFVTCNETRRGGSGSSAAVSISPSGPLGVLLPLLSFMAFIA
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19115.5 | 178 | 8.34 | -0.248 | 43.83 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR016191
Pfam:
SMART:
KEGG:
PRINTS: