Effector profile
| PlantPEAD ID: PlantPEAD11422 | Uniprot ID: U1GDE3 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 364733 | Pathogen type: Fungi |
| Species: Endocarpon pusillum | Strain: strain Z07020 / HMAS-L-300199 | Other name: Lichen-forming fungus |
| Gene name: | NCBI Gene ID: KE721397 | |
| Entry name: U1GDE3_ENDPU | Protein name: Reverse transcriptase Ty1/copia-type domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAGCATGAAGCTGCGATTCCTCCGATACCTTGAGCAAATCCCTATAGATGCAAATGACGATGATCTGCTGCCTCTAAGTGGCAAGCTTGAGTATCAATCGATTATTGGAAGCCTCACATATAGAATGCAGGGCACTCGGCCTGATCTAGCGTATCCTGTATCGCTATTAAGTCGATTTCTGGCCAGGCCAAAGGCTATCCATATGGGTATAGCTAAAGGGGTCCTTCGATATATCCGCAGAACGCTCAGTTATAGCCTCAAATTCTCCAGAATAGGGAATTCAGAGCCTATCTTCTATACGGATTCAGACTTCGCGGGCCCTACTCTGCAAGATGGGATGAAATCAACCTCTGGCTACGTAGGATACCTTGCTGGCGCGCCAATCATTTGGTCCTCAAAGCGTCAAACAGCAACTGCGACCTCTAGCACAGAAGCAGAGTATATCGGCCAATTTAACGCCATGAAGCATATGGTCCATATCGGTCACTTTCTGACGGAACTCTCTATCCCCTATAGCACTCCAATGACGCTATTTGCGGACAACCAGGGCGCTCAAGCAACTGCACGAAATCCGGAGTACTACAGCAGGCTCAAGCACGTTGCTATAGCATACCACTATCAAAGAGAGCTAGTAGAAGAAGGACTTATCCAGCTAGAGCACATTCCGACGGAGGATATGGCCGCCGACGGCCTCACAAAGCCACTTCCGAGAGTCAAATTCAATCGGTTCATAGAACTGCTGCAGCTCAACACCAAGCCAGCTATCTAG
Protein sequence:
MSMKLRFLRYLEQIPIDANDDDLLPLSGKLEYQSIIGSLTYRMQGTRPDLAYPVSLLSRFLARPKAIHMGIAKGVLRYIRRTLSYSLKFSRIGNSEPIFYTDSDFAGPTLQDGMKSTSGYVGYLAGAPIIWSSKRQTATATSSTEAEYIGQFNAMKHMVHIGHFLTELSIPYSTPMTLFADNQGAQATARNPEYYSRLKHVAIAYHYQRELVEEGLIQLEHIPTEDMAADGLTKPLPRVKFNRFIELLQLNTKPAI
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 28902.2 | 256 | 9.1 | -0.23 | 40 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: