Effector profile
| PlantPEAD ID: PlantPEAD11555 | Uniprot ID: A0A6G0WPA6 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 100861 | Pathogen type: Oomycota |
| Species: Aphanomyces euteiches | Strain: ATCC 201684 | Other name: |
| Gene name: | NCBI Gene ID: VJMJ01000167 | |
| Entry name: A0A6G0WPA6_9STRA | Protein name: Reverse transcriptase Ty1/copia-type domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAACGACCCGACCATCGATCGGTAAGTCTCTTTGTCGGTCGATGGTTGACTGCTGTCGTGCCATAGGTCTTCAAGATCATCGACCTGGGGGCAGTGTACCCATTGCATGTCGTCATCCCAAAGCGGGTGAGTATCTTGCGAGCGTACGCCTCTTGCGTCAAGGTAATCTTGCCATCATTCTGATCATACTCAATCTTGATGCCTAGGAAGAATGACATCTCCCCTTGGCGCTTGAGCTTCATCTTGGTTTCGAGTTCGTCGAGGATCGAGTTGGCCTTGGCTGTCGTCCGAGCGAACACCAAGAAGTCGTCAACGTAAGTTGCGACCATTTCCAATTCTTCACCATGTTGTCTTAGATAAAGACACGGATCGTAGTCGCTTGGACGAAAGCCAAGGCCGACCACGATCTTGCGGCAGTGTTCGAACCAGGCAAGAGCCGCCTGCTTCAAGCCATACAGCGCCTTGATCAGCAGCATCTTGCGGTCGGTGCCGTCGCCATGTCCAGGCGGTTGATCGACATAGATCATCACACCTTTGTCGATGAACGCCTGGACAAAGGCAGTGTCTGCATCGGCTTTGAGGACTGCCAACTTCTTGGCCGCTGTCAAGGCCATGCATGTGCGAACAGTTGTCAT
Protein sequence:
MTTVRTCMALTAAKKLAVLKADADTAFVQAFIDKGVMIYVDQPPGHGDGTDRKMLLIKALYGLKQAALAWFEHCRKIVVGLGFRPSDYDPCLYLRQHGEELEMVATYVDDFLVFARTTAKANSILDELETKMKLKRQGEMSFFLGIKIEYDQNDGKITLTQEAYARKILTRFGMTTCNGYTAPRSMILKTYGTTAVNHRPTKRLTDRWSGR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23834.7 | 211 | 9.3 | -0.235 | 28.25 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR043502,IPR013103
Pfam: PF07727
SMART:
KEGG:
PRINTS: