Effector profile
| PlantPEAD ID: PlantPEAD11754 | Uniprot ID: M2SAH0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 45130 | Pathogen type: Fungi |
| Species: Bipolaris sorokiniana | Strain: strain ND90Pr / ATCC 201652 | Other name: Cochliobolus sativus,Common root rot and spot blotch fungus |
| Gene name: | NCBI Gene ID: KB445652 | |
| Entry name: M2SAH0_COCSN | Protein name: VPS28-domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTACAACAGCAGGCCCCTCGCATATGCGCCTACGCCTTATATTCCGCGCTCTAATTTGGCCGCGACCATCAATCTCGACGAGGAAGTCAAGCTCTCAACAACAAACGCGGAGCGCGACTTGAACGATTCTCTTGCCGAAATCTACAGCATCATCATCACTCTGGATGCCGTCGAGAAGGCCTACCTCAAGGACTCGATTGCCGAAGCCGACTACACCGAGACATGCAGCCGGTTAATGAAGCAGTACAAATCGAATCTCGCCAATGAGACGGTTGCACGAGCATTCGGTGATCTGGATCAGTTCGCCAGGGAGTGGCATATGGAGTGTCCAAGGGCCGTCGAGCGATTGCGCGTCGGCATACCCGCTACCGTCGAACAAGGCTCATCGAGACCAGCTCAGCAAGGCGATTTTGGCGATGCGACACTTGTAGTCAATGCGACCGAGACGTTTATTACTCTGCTGGACGCTATTAAGATTGGACTCGTGGAGAAGGACACACTACATCCTCTTCTTGTTGAAATCATACAAGCAGTCAACAAGGTGACTGACGTCGACTTTGAAAACAAGGGCAAGATTGTCCAGTGGCTGATTACGCTGAACCAAATGCGCGCAGCCGACAAGCTGAACGACGAACAGGCGCGCGAGTTCCAGTTTGACATGGACCAGGCTCTCCGTGCAGTCCTCGACCTTCCTCAAATCTACACCAAGCCCTCTGCTGAGGCCCTTCTCGATACCCTCAAACTTCTCACAACTGCCCCACCATCATGGGAGGAGCCTGGAGAATCGAAGCGCAAAGACGGACAAGCGCCGGCAGTCACAGTCAGTCCAGAAGGTGTCACAGGGTACCTCACGAGCATCATTGGCAGTGACCTACGGTGGATAGAGGGTGAAGAATTGAAGGAGCAGATCTGGGACCAAGCCAGCGCAAGGCTCAGCGAGCGCTCTGGACGGTCTGCCATGGGCGCAATGTCACGTTCATTTCACATTCCCACCTCCTCCGACGCTTTCAACCTCAGTATCCATGAACCGACTATGACTGGCGACGACCTGGGTCTGAAAACTTGGGCAGCCTCGTATCTCCTCGCGAAACGCCTCAGCTCGTTCGATCTGGTCCCCAAGGATACACAAAGTAGATTACAAGTCCTTGAACTTGGTTCGGGAACTGGGCTGGTTGGACTCGCCATGGCAGGCCTGGGTGCAGACGTCGTGCTGACAGACCTGCCCAGCATCTGCCCAAACCTTAAATACAACATACTTCAGAATGACGATGTGGTTAGCGGGAACAATGGAAGTGCTCGCGCAGCCGTGCTTGATTGGACTGAGCCTCAGGTCTGCGAGCCGCTACAGGACGACGGTGAGGCCGTGCCCGCAAAGTTTCCAGTAATCCTGGCTGCAGATTCGCTGTACTCTGCAGATCATCCCCGCATGCTGGTAGACGCGATTGCGGTTTGGCTTTCGCAGGATAGCGAGGCCAAGGTCATTGTGGAGTTTCCCTACAGAGATGCATATCTGCCGCAGATTGAAGACTTTCGCCGTCGGATGCTTGAGATTGGGCTGCAGATAGTGGATGAAGGTGAAGAGAAAGGATATGACGACTGGGGCGCGTCCAGGGCGAGCGGTGACCCAGACGACGGTGCGCTCGTGACATGTTGGTGGGCATGTTGGACGAGGAAAGGCTCAAGTGGTAAAAGGCCACCAGTCAATGGCTAA
Protein sequence:
MYNSRPLAYAPTPYIPRSNLAATINLDEEVKLSTTNAERDLNDSLAEIYSIIITLDAVEKAYLKDSIAEADYTETCSRLMKQYKSNLANETVARAFGDLDQFAREWHMECPRAVERLRVGIPATVEQGSSRPAQQGDFGDATLVVNATETFITLLDAIKIGLVEKDTLHPLLVEIIQAVNKVTDVDFENKGKIVQWLITLNQMRAADKLNDEQAREFQFDMDQALRAVLDLPQIYTKPSAEALLDTLKLLTTAPPSWEEPGESKRKDGQAPAVTVSPEGVTGYLTSIIGSDLRWIEGEELKEQIWDQASARLSERSGRSAMGAMSRSFHIPTSSDAFNLSIHEPTMTGDDLGLKTWAASYLLAKRLSSFDLVPKDTQSRLQVLELGSGTGLVGLAMAGLGADVVLTDLPSICPNLKYNILQNDDVVSGNNGSARAAVLDWTEPQVCEPLQDDGEAVPAKFPVILAADSLYSADHPRMLVDAIAVWLSQDSEAKVIVEFPYRDAYLPQIEDFRRRMLEIGLQIVDEGEEKGYDDWGASRASGDPDDGALVTCWWACWTRKGSSGKRPPVNG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 62745.8 | 570 | 4.59 | -0.269 | 43.75 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR037202,IPR019410,IPR029063,IPR007143,IPR017899,IPR037206,IPR017898,IPR038358
Pfam: PF10294,PF03997
SMART:
KEGG: bsc:COCSADRAFT_30309
PRINTS: