Effector profile
| PlantPEAD ID: PlantPEAD11823 | Uniprot ID: A0A066X3L2 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1173701 | Pathogen type: Fungi |
| Species: Colletotrichum sublineola | Strain: TX430BB | Other name: Sorghum anthracnose fungus |
| Gene name: | NCBI Gene ID: JMSE01001202 | |
| Entry name: A0A066X3L2_COLSU | Protein name: Putative cwf18 pre-mRNA splicing factor | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCAAGCTCGCAAGGAACCCTAAGCGCCGTCACAGACGAGCGCAAAGCGCGCCTAGCGAAGCTCAAGAACCTGAAGAGAAAACAACCAACAGACGAGGTCGCCCCCCCCGAGTCAGAACGAACAGCCTCGCCGCCAGCAGAGCCAGATGTCGCAAGATTGCACCTCTCCGGCCGAAACTACGACCCCGAAGCACGAGGACCCAAGCTCGGTTTCGAGGCGCCTCCGACACAAGATTTGGAACAGCCCACGCTCGAGGAGCTTGCGGCAGATATCGAAGCCGACGTCAAGAAAAAGGCGGCCGAGGAAGCGCAAGACGACAAGGGCATCGACCTATTCAAGCTGCAGCCGAAAAAGCCGAACTGGGATTTGAAAAGAGATTTGGAGAAGAAGCTAGAGGTTCTCAACGTGCGGACGGACAATGCAATCGCGAAGCTTGTGAGGGAGCGGATCACGGGGGCGCAGAATGCGGCAACAAAGGCGAAGCAGGTCGACTCAGAGAGTAGAGAGGGCGACGCGGCTGGGATGGACGGCATTGCGCTGGTCGAAGGAGTCCGTGTCCGTGAGAGGGAGGAAGAAGAGGACGAAAGACGGCAGAAGGAAGAGGATGATGATTTGGCTGTTTAG
Protein sequence:
MSSSQGTLSAVTDERKARLAKLKNLKRKQPTDEVAPPESERTASPPAEPDVARLHLSGRNYDPEARGPKLGFEAPPTQDLEQPTLEELAADIEADVKKKAAEEAQDDKGIDLFKLQPKKPNWDLKRDLEKKLEVLNVRTDNAIAKLVRERITGAQNAATKAKQVDSESREGDAAGMDGIALVEGVRVREREEEEDERRQKEEDDDLAV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23114.7 | 208 | 4.93 | -1.037 | 50.69 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013169
Pfam: PF08315
SMART:
KEGG:
PRINTS: