Effector profile
PlantPEAD ID: PlantPEAD12192 Uniprot ID: A0A0D5CH22 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 28447 Pathogen type: Bacteria
Species: Clavibacter michiganensis Strain: subsp. insidiosus strain R1-1 Other name:
Gene name: NCBI Gene ID: CP011043
Entry name: A0A0D5CH22_9MICO Protein name: ABC transporter
DOI:
Gene/Protein information
Gene sequence:
TCAGCGGCCGCGGCGGCCCGGGAGGACGGCCTGCGCGAGCGGGATCACCGCGACGACCAGCAGCACGGTGCCGAGCACCTCGTCGTCCGGGCGGAGGAGCACGCCGCCCGCGAGGAGGCCGCCGAAGACGAGCGCGGAGACCGCGCGGCGCAGGGTGCGCTCGAGGGCGCCGACGCGGCGCTCGAGCGTGGGATCGCTGATGGGCAGGGCGCCGTCGTCGATGCGCGTGAGCAGCGCGTCGACGCGGCCCGGCAGACGGGCCAGCGTGCCGGCGGTGTCCGAGACGCGGGTGCCGAGGTCGCGCACGACGTTGCCGCGCTCCTCCCGGATGAGGCGCTGCGCGTACGGCTCGACGGAGTCCCAGAGGTTGAACGCGGGATCCAGCGCGCTGCACACGCCCGACGTCAGCGACATCGCGCGGATGATGAGCCGGAAGTCGTCCGGCAGCTGGAACGGCAGGGTGCGCACCACCTCCTGGAACTCGTTCGCGAACGCGCGGAACTCCCGCGGATCGACCTCACGCAGCTCCGCGAAGCCCAGGCCGCCGAAGCGGGCGAAGAGGCGCGTCATGGCGAGCTCGAGCTGCGTGGTGTCAGCCGACGGCAGCAGCACGCCGATGTCGCGGGCCGCGTCGACGAGCCCCTTGCCGTCGCGCGAGGCGGCGGCGATGAGCATCTTGCGGAGGCCCCGTCGCGTGCTCGGCGGCACCTCGCCCATCATCCCGAAGTCGATGAAGGTGAGGGTCCAGCCCTGCTCGACGGAGCCGTCCGTCACGGGCGTGACGAAGACGTTGCCGGGGTGCGGATCCGCGTGGAAGAAGCCGTCGGCGAAGAGCTGGTCGAACATCACGGCGGCGAACACGGGCGCGACGTCGACGGGGTCGATGCCGGCCGCGAGGAGCCCCGCGTGGTCGGTGATCTTGATGGCGGTGACGTCCTCGAGCGTGAGCACGCGCCGGGTGCTGCGCTCCCAGACGATCTCGGGCACGGCCACGCGCTCGTCGGCGGCGAACATCTCCTGGAAGCGGGCCGAGCTGCGGGCCTCGTGCAGGTAGTCGATCTCCTCGAGGCTCGTCTCGGCGAACTCCTCGACGAGCGCGGGTGCGTCCACGCGGTCGGACACGAGCCGGACGTGCGTGAGCCAGCCGCCGATGCGGCGGAGGGCGGCGAGGTCGATGCGGACGATGTCGTCGATGCCGGGCCGCTGCACCTTGATGACGGCGCCCGTGAGGCCCGTGTCGGCGGAGTCGATCGGGCCGAGGATCGCGCGGTGCGCCTGGCCGAGCGACGCGGCGGCGACGGGCGTCTCGTCGACCCAGGCGAACGCGGCGGCGAGCGGCATGCCCAGCTCGCGCTCGGCGAGGGCGCGGATCTCGGGGAACGGGACGGCGGGCACCTCGTCCTGCAGGTCCTCGAGCTCCGCCGTGATCTCGGGCGGCAGCACGTCGAGGCGCGACGACATGAACTGGCCGACCTTGATCATGAGCCCGCCGAGCTCGACCGCGAGCACGCGGAAGCGGCGGGCGAACAGCTTCATGCGCCGGGTGCGCGTGCGGTCGGCGATGCGGCGGAGGCCGACGCGGGGGAGGAAGAGCTCGTACCACCAGGTGACCGCGAGGTTCCAGGCGGCGAAGCGGAGGATGCGGCGGTAGCGGGCGCGCGTCTCCGGGGCGTCGGCCTCGGGGTCCCGCCCGGGAGCGGCGCCGGCCGTGGCCGCGGTCAC
Protein sequence:
MTAATAGAAPGRDPEADAPETRARYRRILRFAAWNLAVTWWYELFLPRVGLRRIADRTRTRRMKLFARRFRVLAVELGGLMIKVGQFMSSRLDVLPPEITAELEDLQDEVPAVPFPEIRALAERELGMPLAAAFAWVDETPVAAASLGQAHRAILGPIDSADTGLTGAVIKVQRPGIDDIVRIDLAALRRIGGWLTHVRLVSDRVDAPALVEEFAETSLEEIDYLHEARSSARFQEMFAADERVAVPEIVWERSTRRVLTLEDVTAIKITDHAGLLAAGIDPVDVAPVFAAVMFDQLFADGFFHADPHPGNVFVTPVTDGSVEQGWTLTFIDFGMMGEVPPSTRRGLRKMLIAAASRDGKGLVDAARDIGVLLPSADTTQLELAMTRLFARFGGLGFAELREVDPREFRAFANEFQEVVRTLPFQLPDDFRLIIRAMSLTSGVCSALDPAFNLWDSVEPYAQRLIREERGNVVRDLGTRVSDTAGTLARLPGRVDALLTRIDDGALPISDPTLERRVGALERTLRRAVSALVFGGLLAGGVLLRPDDEVLGTVLLVVAVIPLAQAVLPGRRGR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
62838.4 573 5.35 0.087 39.35
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.