Effector profile
| PlantPEAD ID: PlantPEAD12469 | Uniprot ID: M2T8P9 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 45130 | Pathogen type: Fungi |
| Species: Bipolaris sorokiniana | Strain: strain ND90Pr / ATCC 201652 | Other name: Cochliobolus sativus,Common root rot and spot blotch fungus |
| Gene name: | NCBI Gene ID: KB445641 | |
| Entry name: M2T8P9_COCSN | Protein name: 3-carboxymuconate cyclase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAAGGCGACTGTCACTGCGCTAGCTTTATTAGGATCGGCAGCCGCTGAGCGCCTCCTCCTAGCATCTTATGGCACCGACTCGAATCTGGGCGCCGTTACGACTCTCGAACTCTATCCCAGCACTGGTTCTAAATGCAGCCGAAAGCTGGAGGTTATTCACAACAGCCAAGAATGCGGTTCCCTTCCTACTTGGCTCGACACAAGCCTCGGTCAGAATAAGGTGATCTGCCTAGATGAATCAGGCAATGCCAACATTACGACATTCAATCTCCAGCCCAATGGTAGTCTGAAGAAGATTTCTAGTTCGCCTGCGCTGGGTGGTGCTGTATCTTCAGCAACTTATAATAACGGGTCGGCTATAGCACTCGCTCACTATGGACCTCCAGCAATATCTTCCTACTCCGTACATGGCAACAGCCCCCTTCAATCCCTCCAAAACATCACCTTCGCGGACCCAGAAAAGATCCACCAAGCCGTCCTTGACCCTACAGGGCAGTACATGATCTTCCCTAGTCTGGGCGTTGACCGTGTCCACGTTTACGCGATCAATCCCACCAGCGGCCAACTAATCCAACTGGAGTCTCTGGTCTCCCCAGCCGGCTATGGCCCCCGCCACGCTGCCTTCTGGACCTCCAAACAATCAGGCTCCACCTTCCTCTTCGTCGTTCATGAATTCAGCAACAAAATCATCAGCTACAAGGCCACCTACCTCGCCAACCACGCCGGAATCAAGTTCACCCAGGTCGACGAAGTAAGCACCTACGGCAACTACACACTCCCGAACAGAAAACTGTCCGCCTCGGAAATCTCAATCTCACCTGACAATGCGTTTGTGCTTGCCGGAAACCGCAACGGCACCATTTTCACCGTCGATAATCCGGATCCGAAGAATAGCACAAAAGTGCCCAGCGACTCGATTGTTACGTATAAGCCGTCGGCGGATGGTAAACTGAAGTTTGTCCAGCTAGCCAAATCTGGGGGCTATTTTCCGCGCCATTTCCAGGTGAGCAAGGATGGCGCGTTGATTGCGGTTGCGAATCAGCGGAGTAACAATGTGGCAATTTATGCGAGGGATGTCAAGACGGGGGTTATTAAGGATGATAAGCCTGTGGCGGGGGCTGCGGGTCTTGGACCGGGAGATCTCATGTACATCACATGGATCTGA
Protein sequence:
MKATVTALALLGSAAAERLLLASYGTDSNLGAVTTLELYPSTGSKCSRKLEVIHNSQECGSLPTWLDTSLGQNKVICLDESGNANITTFNLQPNGSLKKISSSPALGGAVSSATYNNGSAIALAHYGPPAISSYSVHGNSPLQSLQNITFADPEKIHQAVLDPTGQYMIFPSLGVDRVHVYAINPTSGQLIQLESLVSPAGYGPRHAAFWTSKQSGSTFLFVVHEFSNKIISYKATYLANHAGIKFTQVDEVSTYGNYTLPNRKLSASEISISPDNAFVLAGNRNGTIFTVDNPDPKNSTKVPSDSIVTYKPSADGKLKFVQLAKSGGYFPRHFQVSKDGALIAVANQRSNNVAIYARDVKTGVIKDDKPVAGAAGLGPGDLMYITWI
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41220.5 | 388 | 8.74 | -0.111 | 33.03 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR019405,IPR011045,IPR015943
Pfam: PF10282
SMART:
KEGG: bsc:COCSADRAFT_169831
PRINTS: