Effector profile
| PlantPEAD ID: PlantPEAD12474 | Uniprot ID: W6Y6X5 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 5017 | Pathogen type: Fungi |
| Species: Cochliobolus carbonum | Strain: strain 26-R-13 | Other name: Maize leaf spot fungus,Bipolaris zeicola |
| Gene name: | NCBI Gene ID: KI964616 | |
| Entry name: W6Y6X5_COCC2 | Protein name: 3-carboxymuconate cyclase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAAGGCGACTATCACCGCGCTAGCTTTATTAGGATCGACAGCCGCTGAGCGCCTCCTCCTAGCTTCTTATGGCACCGACTCGACTCTGGGCTCTGTTACAACTCTCGAACTCTATCCCAGCACTGGTTCTAAATGCAATCGCAAGCTCGAGGTTATTCACAACAGCCAAGAATGCGGTCCCCTTCCTACTTGGCTAGACACAAGTCTTGGTCAGAATAAGGTGATCTGCCTGGACGAATCGGGCAATGCCAATATCACGACATTCAATCTCCAGCCCGATGGTAGTCTGAAGAAGATTTCCAGTTCGCCTGCGCTCGGCGGCGCTGTATCTTCAGCAACTTATAACAACGGATCGGCTATAGCACTCGCTCATTATGGACCTCCAGCGATAAGTTCCTACTCCGTACACGGCAACTCTCAGCTACAGTCCCTCCAAAACATCACATTCGCCGACCCAGAAAAGATCCACCAAGCCGTCCTCGACCCAACAGGGCAGTATATGATCTTCCCCAGTCTGGGCGCCGACCGCGTCCACGTCTACGCCATCAACCCCACCACCGGCCAACTAGCCCAACGCGAGTCTCTAGTCTCCCCAACCGGCTACGGCCCCCGCCACGCCGCCTTCTGGACCTCCAAAAAATCAGACTCCACCTTCCTCTTCGTCGTCCACGAATTGAGCAACAAAATCATTAGCTACAAGGCCACCTACCTCGCCAACCACGCCGGCATCAAGTTCACACCAGTAGACGAAGTAAGCACCTACGGCAATTACACCCTCCCAAACAAAAAGCTATCCGCCTCGGAAATCTCAGTCTCCCCCGACAACGCCTTTGTGCTTGCCGGAAACCGCAACGGCACCATTTTCACCGTCGACAACCCGGATCCCAAGAACAGCACCAAAGTACCCAGTGACTCGATTGTGACGTATAAGCCGTCAGCGGATGGCAAGCTGAAGTTTGTCCAGCTGGCCAAATCTGGGGGTTATTTCCCGCGCCATTTTCAACTGAGCAAGGATGGTTCGATGATTGCGGTTGCAAATCAGCGGAGTAACAATGTGGCTATTTATGCGAGGGATGTCAAGACGGGAATTATCAAGGATGATAAGCCTGTAGCGGGAGCTGCGGGTCTTGGACCGGGAGATCTCATGTGA
Protein sequence:
MKATITALALLGSTAAERLLLASYGTDSTLGSVTTLELYPSTGSKCNRKLEVIHNSQECGPLPTWLDTSLGQNKVICLDESGNANITTFNLQPDGSLKKISSSPALGGAVSSATYNNGSAIALAHYGPPAISSYSVHGNSQLQSLQNITFADPEKIHQAVLDPTGQYMIFPSLGADRVHVYAINPTTGQLAQRESLVSPTGYGPRHAAFWTSKKSDSTFLFVVHELSNKIISYKATYLANHAGIKFTPVDEVSTYGNYTLPNKKLSASEISVSPDNAFVLAGNRNGTIFTVDNPDPKNSTKVPSDSIVTYKPSADGKLKFVQLAKSGGYFPRHFQLSKDGSMIAVANQRSNNVAIYARDVKTGIIKDDKPVAGAAGLGPGDLM
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 40689.9 | 383 | 8.73 | -0.202 | 32.04 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR019405,IPR011045,IPR015943
Pfam: PF10282
SMART:
KEGG: bze:COCCADRAFT_96811
PRINTS: