Effector profile
| PlantPEAD ID: PlantPEAD12549 | Uniprot ID: A0A4Q4NUB1 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 5599 | Pathogen type: Fungi |
| Species: Alternaria alternata | Strain: FERA 1177 | Other name: Alternaria rot fungus,Torula alternata |
| Gene name: | NCBI Gene ID: PDXD01000002 | |
| Entry name: A0A4Q4NUB1_ALTAL | Protein name: 3-carboxymuconate cyclase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAACACTTTACTCATCGCTTTGTCAGTTATAGGGCAAGCAGCTGCCGACCGGCTGCTGGTGGCTTCATACGGAAATGAAACTCATGCTGGCGCCATCCAGACGCTCGAAGTACTGCCTAGCACAAGCGCAAATTCTAGCCATGCGATGAAAGTTACCCAAGAGAACCACGAGTGTGGAACTTTGCCTACATGGTTGGATGCGTCCCTTGGCCTGGATAGGATAGTCTGTCTAGACGAATCAGCTGCCAATGCTAGTCTCACAATGTTGAGCCTTGGTGATGACGGCAGCCTCCAAAAGGTGTCCAATACCAGTGTGCTGGGAGGAGCAGTATCCTCGGCGTCCTACAATAACAAATCCGCATTAGCCCTTGCTCACTACGGACCCGAGCCAGCCATATCACTGTTTACTATCGATGGGGAAAACAAATTTTCGTCTTTGCAAAACATCACCTTCCAGGCGCCTGAGCAAATCCATCAAGCGGTCGTCGATCCTACGGGGCAATACATGATATTCCCCAGTCTCGGTGCAGATACAGTCCACGTCTATTGCATCGATCCTGTCAGCCACTTGCTCACAGAGCATGCGCCACTCAAATCCAAGCAAGGATACGGTCCGCGACATGCAGTTTTCTGGACAGGTTCCAATTCTACAAAGACGTACCTTTTTGTAGTCCATGAGAAGAGCAACAAAATCACTAGTTACGAAGTTTGTTATCTGGAGCAGGGTGGCCTAGCTTTTACCGAAGTCGACGAGGTCAGCACATACGGCAATCAAACCGTCCCACCAGCGACGTTCGCTTCGGAGATGACGCTCTCGCCTGATAACAAGTTCTTGATCGCAGCAAACCGTAACGGCACAGTTTTCAAAGCAGAGAATTCGGACCCAACCAACAGCACTCAAGTTCCAAGTGATTCACTTGTGACGTTCAAACCGTCAGCCGACGGGAAGCTATCGTTTGTCCAGCTTGCAAAATCAGGGGGATGGTACCCTCGCCACTTCAGTATGAACCAGAATGGATCGTTGATTGCGGTCGCAAATCAACTCAGCAAAAACGTCGACATCTATGCCCGTAACCTAGAAACTGGAATCATCGAAGACAGCAAAGCGGTGGCAAGAGCTAATAATCTCGGGCCCGGCGATTTGATGTAA
Protein sequence:
MNTLLIALSVIGQAAADRLLVASYGNETHAGAIQTLEVLPSTSANSSHAMKVTQENHECGTLPTWLDASLGLDRIVCLDESAANASLTMLSLGDDGSLQKVSNTSVLGGAVSSASYNNKSALALAHYGPEPAISLFTIDGENKFSSLQNITFQAPEQIHQAVVDPTGQYMIFPSLGADTVHVYCIDPVSHLLTEHAPLKSKQGYGPRHAVFWTGSNSTKTYLFVVHEKSNKITSYEVCYLEQGGLAFTEVDEVSTYGNQTVPPATFASEMTLSPDNKFLIAANRNGTVFKAENSDPTNSTQVPSDSLVTFKPSADGKLSFVQLAKSGGWYPRHFSMNQNGSLIAVANQLSKNVDIYARNLETGIIEDSKAVARANNLGPGDLM
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 40907.8 | 383 | 5.23 | -0.133 | 28.25 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR019405,IPR011045,IPR015943
Pfam: PF10282
SMART:
KEGG:
PRINTS: