Effector profile
| PlantPEAD ID: PlantPEAD12766 | Uniprot ID: A0A6G1M4C8 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 2813651 | Pathogen type: Fungi |
| Species: Orbilia oligospora | Strain: TWF106 | Other name: Arthrobotrys oligospora |
| Gene name: RAB11B_1 | NCBI Gene ID: WIWT01000120 | |
| Entry name: A0A6G1M4C8_ORBOL | Protein name: Ras-related protein Rab-11B | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAGTGACGATTATGATTTCCTTTTCAAAGTTGTCTTGATTGGAGACTCCGGGGTTGGAAAATCCAATATTCTAAATCGTTTCGCCCGGAATGAATTCAACGCGGACTCAAAATCTACGATTGGTGTCGAGTTTGCTACACGATCTCTACAGATCGATACGAGGACAATAAAGGTACAAATTTGGGACACAGCTGGCCAAGAACGGTATCGTGCTATCACCGGAGCGTACTATCGAGGCGCCGTAGGGGCTCTTCTTGTTTATGACATCTCGAGACGTGAAAGCTTTGAGGGTGTTAGTAGATGGTTGCAAGAAGTCAAAGATAGGGCTGACCCTAACATTTTGATGATGCTTGTGGGGAATAAAAGCGATTTAAAAGCGCGTCGAGAGGTTCCCACTGAAGAGGCAAAAGCATTCGCTGCTACGAATAAGTTGTCATTCATTGAGACGTCTGCTCTCGATGCATCAAACGTAGAACTTGCGTTTATAAACATTCTGACGGATGTATACCGAGTGGTTTTAAGCCGAGTAGATGGAGACAAGGAAGACGTTGGATCTACTTCCAAGCAGCCTTTCTCACTTCCTCTATCAGATGAAAGTAATGGTGGTGGTGGTGGTGGTGATGGTGGTGGCAAATGCTGTTAG
Protein sequence:
MSDDYDFLFKVVLIGDSGVGKSNILNRFARNEFNADSKSTIGVEFATRSLQIDTRTIKVQIWDTAGQERYRAITGAYYRGAVGALLVYDISRRESFEGVSRWLQEVKDRADPNILMMLVGNKSDLKARREVPTEEAKAFAATNKLSFIETSALDASNVELAFINILTDVYRVVLSRVDGDKEDVGSTSKQPFSLPLSDESNGGGGGGDGGGKCC
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23382.2 | 214 | 5.08 | -0.296 | 45.82 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR027417,IPR005225,IPR001806
Pfam: PF00071
SMART: SM00175,SM00176,SM00173,SM00174
KEGG:
PRINTS: PR00449