Effector profile
| PlantPEAD ID: PlantPEAD12924 | Uniprot ID: A0A1C3YN69 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 5518 | Pathogen type: Fungi |
| Species: Fusarium graminearum | Strain: ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1 | Other name: Gibberella zeae, Wheat head blight fungus |
| Gene name: | NCBI Gene ID: HG970333 | |
| Entry name: A0A1C3YN69_GIBZE | Protein name: Postreplication repair E3 ubiquitin-protein ligase RAD18 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATCACGAACTGTTCCCATACATTCTGTTCACTTTGCATTCGAAGAGCACTATCAAACGATGGCAAATGTCCACTTTGTCGTGCAACAGAGCAAGAGAACAAATTACGAAGCAATTGGTCATTGGAAGAGGCTGTACAAGCCTTTGTTAGAGCTAGATCAGACACTTTGGAGTTGGCGCGAAAAGGCAATTCCCAAAACACGACATCAAAACGAAAAGCCACAACTGATCATCACGACTCCTGTAATTCACCAGAGGGCAAACGCCTACGGTCATCCTCACGATTACAGAATACTCGGTCTTCGGCCCGTCAGACACCGCAAATACAATACGATGAAACTGTCGAAGTCCCAGACAGCGATGGCGAAGACGACAACGATGACGACGAATTCCAACCAGAGCCAGAGGACGGTCTGGTTGCATGTCCCGTCTGCCAGGATCGAATGAAGGATTGGCAGGTCTTTACGCATCTAGAATCATGCACTGGGCCAAAGCCGAAACCGCAGCAGATTGTGCCCAGCGTTTCCAGTCCAATATACAGTCAACAACGACAGCCTACAAAGGCGCCCGACCGACTTCCTACAATCAATTACTCTATGTATAAAGAAACGGCACTGCGAAAGAAGATGGCCGATCTTGGCATTTCTAATCAGGGACCCCGCGCTCTACTTGAGCGACGACACAAAGAATGGATGACAATATGGAACTCAAACTGCGACGCTGCGCAACCTAGGACGCGCCACGACTTACTACGTGATCTAAACGTTTGGGAAAACACACTAGGAGCACGGGCTCCGACAACAGGGCGGGCTGTTCAAAACGCGGCTATTATCAAAGACAAAGACTTTGATGGCGCAGCATGGGCCGCTAAACATGACACATCCTTCAAAGACTTGATCGCAAATGCAAGAAAGACGATGCTTGATGCAAAGGAGAAGGCCGAGAAAGCGGCCAGAGAGACGGAGGTGGAAGAGGCTGCTAAGGCACATTCCCAAGCACAGGAGCCAGAGGTTCCCACTCAACAGCTGACTGGGCGAATAACTGGGCGAATAGTCCCCAGTACAAGGGAACCACCAGGAGAAAGCTTCCAATGA
Protein sequence:
MITNCSHTFCSLCIRRALSNDGKCPLCRATEQENKLRSNWSLEEAVQAFVRARSDTLELARKGNSQNTTSKRKATTDHHDSCNSPEGKRLRSSSRLQNTRSSARQTPQIQYDETVEVPDSDGEDDNDDDEFQPEPEDGLVACPVCQDRMKDWQVFTHLESCTGPKPKPQQIVPSVSSPIYSQQRQPTKAPDRLPTINYSMYKETALRKKMADLGISNQGPRALLERRHKEWMTIWNSNCDAAQPRTRHDLLRDLNVWENTLGARAPTTGRAVQNAAIIKDKDFDGAAWAAKHDTSFKDLIANARKTMLDAKEKAEKAARETEVEEAAKAHSQAQEPEVPTQQLTGRITGRIVPSTREPPGESFQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 40912.6 | 364 | 7.07 | -0.959 | 52.77 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR039577,IPR004580,IPR006642,IPR003034,IPR001841,IPR013083,IPR017907
Pfam: PF13923
SMART: SM00734
KEGG:
PRINTS: