Effector profile
| PlantPEAD ID: PlantPEAD13128 | Uniprot ID: A0A090C2W7 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 272952 | Pathogen type: Oomycota |
| Species: Hyaloperonospora arabidopsidis | Strain: Emoy2 | Other name: Peronospora arabidopsidis |
| Gene name: HaRxLCRN22b | NCBI Gene ID: AB922590 | |
| Entry name: A0A090C2W7_HYAAE | Protein name: RxLR effector candidate protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGTGCAAGTCACGTTGCTTTGTGCGATCGTTGGATTACCTCGATGTGTTTCCGCTGTCAAAATTGACACGAACGAAGTGGTGGGGATCTTGAAGAAAGCGATAAAGGAGGATAACGCAGTGGATGTCCGGTGCGATGCTAGAAAGCTGCGGCTCTTCCTGGCGAAAAAAGATGGGGTGTGGCTGCGAGACGACGGTGATTTGGACAAACTGATTCAGACCGAAGGATTTCTTGATGGGATGGAGGAGATGCACGCTTCGTGGCGATTAGGAAAGCCCAGTCTGTTTGATTCCGGTCTTTTTCTTGAAGAAGACGTTGTCCACGTGCTGGTGGTGCTTCCGCGGACTATGGCTAGTCCGTTAGGCGAGTCGATTACTGTGGGCGGTGTCACGATTCCCGTCACG
Protein sequence:
MVQVTLLCAIVGLPRCVSAVKIDTNEVVGILKKAIKEDNAVDVRCDARKLRLFLAKKDGVWLRDDGDLDKLIQTEGFLDGMEEMHASWRLGKPSLFDSGLFLEEDVVHVLVVLPRTMASPLGESITVGGVTIPVT
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 14758.3 | 135 | 5.14 | 0.261 | 27.91 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR045379
Pfam: PF20147
SMART:
KEGG:
PRINTS: