Effector profile
| PlantPEAD ID: PlantPEAD13660 | Uniprot ID: A0A6I4G4E3 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 373 | Pathogen type: Bacteria |
| Species: Agrobacterium vitis | Strain: VAR03-1 | Other name: Rhizobium vitis |
| Gene name: | NCBI Gene ID: AP023268 | |
| Entry name: A0A6I4G4E3_AGRVI | Protein name: Tyrosinase copper-binding domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAACCGGGTTGACGATAAAGGCTGATGCGTTCGACCGTAACCTTTGCATCGTCTCCCAGCGCTATCCGGGGTACGAGATGGACGCTCAAGCCGCTCTTGGCGATATCGCCACTATGGATCAAGCCGGACAGGAGCGTGGTAATGTCAAGAACTTGCGTCACGCCCTTTCCGCCATGGGAGCTGTCGGCTTTTGATGCATCGCTAACCCCGAACAGGCCGATAGAGCCAGCATGCAGGTCCAAACGGTGCGCATGATCGGCATCATCGGGCAAATTGAGATAGACATCTATCACGAAGCCATCCTGTTGCGCACGGATGTTTTCCAGGTTGAGGAAATACCGATCAAGAGGGACATCGCCACTGCGGAGCCCCAGAGCCAATGTTTTCGGTGCAGCGAAAAGCGCCGTCGACGCGTCGTCCAGACGGATCACCGATGGCGTTTTTTCACCAGCTAGAGCAACGACATCTTCATTCGCCCCGATCAGTTCGGCAGTCTTAGGTTCCGCCACCGTTTTTCCTCCTGCTGTCGTCGCCACCAGAACAGGGGCTTGAGCGACAACGAACTGCTGATAGGTATAATTCAGTTTCGGGCTCTTGGTCTCCAGCATATCCGAAGGCTTATAGTAATATGGCGTTCCATCCGGGTTCGGCACCACGAATTGCCGTTCCTGAGGCCCGTTCAACCAAGCCGGGTCGGTCGGGTTTTTATGCAGGGATGACTCGGCATTCCATTGTGCCCAAAGCCGATCAATATTGGCATGATGTAGCCAGAAGATCGGATCGAGGCCCGCCGTGTTGGGTTTGGACATGAGACCAGGCAGGTTCGGGTCGTTGTCAAGATAGCCACCGATATCTATATGGACCAAATTGTGAGGCTTGCTCTCCAGTAAACCAAACGATGTGCTGTTGTGGGAAAAGCCCGTCTTGACGCCACCAAAACCAGGGCTACCACCAGAGGAAACGCCGGTGAAAATCGGCCAGAGCAGTGCCTCCAGCGTCACATCCTTATAAGGCACGATGATCGGTGTCTTTCCAGAGCCGTAGCGCTGCTTGATATACAGCGGGTTGGGCGCGCCTTCGAATGTTTCCTGCGCGAAGGCGGGTGGCATGACCCGGGCTTTGTGATTGGCCGTGTCGCTGTAGTTCCAATAAGGCATGGCCCAGTCCGCCGGCCCTCCCAGAGCAACGATCTGCGCCCGCACAAGCGCTTCAATCGACCAGATATAACCGCGATGCCAGGGCAGAAAATACCAGCTGCCATGCTGGCACTGCTTCCAATAAAGTTTCTGGTCCGCTTGGGACGGCAAGGGCTCTCCAGCCGTGTAATACCCATATTTCGTCCAGAGACTAAGTTGATCCGGCTTATCGATATCAATCCCGTGGATCGCAGCCATGAAATTCCAGCTGGTCTTATCGGCCAAGGGTTTTTCACGCAGCTTGCCGACACCCTTGGCGTACCAATAGAGAATTGGATCGCTGAAATCGCCGCCATTCGCCCATACACTTTTACGAACGTAAACCAT
Protein sequence:
MVYVRKSVWANGGDFSDPILYWYAKGVGKLREKPLADKTSWNFMAAIHGIDIDKPDQLSLWTKYGYYTAGEPLPSQADQKLYWKQCQHGSWYFLPWHRGYIWSIEALVRAQIVALGGPADWAMPYWNYSDTANHKARVMPPAFAQETFEGAPNPLYIKQRYGSGKTPIIVPYKDVTLEALLWPIFTGVSSGGSPGFGGVKTGFSHNSTSFGLLESKPHNLVHIDIGGYLDNDPNLPGLMSKPNTAGLDPIFWLHHANIDRLWAQWNAESSLHKNPTDPAWLNGPQERQFVVPNPDGTPYYYKPSDMLETKSPKLNYTYQQFVVAQAPVLVATTAGGKTVAEPKTAELIGANEDVVALAGEKTPSVIRLDDASTALFAAPKTLALGLRSGDVPLDRYFLNLENIRAQQDGFVIDVYLNLPDDADHAHRLDLHAGSIGLFGVSDASKADSSHGGKGVTQVLDITTLLSGLIHSGDIAKSGLSVHLVPRIALGDDAKVTVERISLYRQPG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 55623 | 507 | 6.14 | -0.253 | 29.5 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR008922,IPR002227
Pfam: PF00264
SMART:
KEGG: avf:RvVAR031_20190
PRINTS: PR00092