Effector profile
PlantPEAD ID: PlantPEAD13689 Uniprot ID: G9FYW2 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 31243 Pathogen type: Nematoda
Species: Globodera rostochiensis Strain: Obersteibach Other name: Golden nematode worm, Heterodera rostochiensis
Gene name: ExpB3 NCBI Gene ID: JN226222
Entry name: G9FYW2_GLORO Protein name: Expansin B3
DOI:
Gene/Protein information
Gene sequence:
ATGCCCAAATGGTTTTGGCCGATGTTACGGCCTCATTAAAAACATCGAACACTTGGAACGGAGGTGGCCAATACGTGCCGAACTTCAAGAACAATGCCGGCTCCCAAATCGTGTGCTCCGTCAAATTCTCGTTGACGCCAAAAAGCGGAACGTCCATCGTAAGCATATGGGGCGCTAACGCGGTCAGCGGCTCCTCCAACGAGTACACGTTGGCCGACAATGCCGACATTGCGCCGGGCGCAACAAATACAAATGCCGGAGTGAACATCAACGGAAACGGCGCGCCCACCCTTAAGCTGATCGAAGCCAAATATTACATCAACGGCATCTGCGGTGGAGCTCCGAGCGGATCTTGCATGGGCTGTCTGTCGAGCACGTCCACGGACGGGCCAATCAACCAGAACCTGAATAAGCCGTTCACGAACAGTGTGTTCACCTTCTACGGAGCCAGTGGACGCGGCGCGTGCGGCCTTGACGCGGGCGTGCCCAAAATGTCGGCGGCCGGATCCGGCAATCTGTTCAAGTCGGACGGGCAATGGAAGGACGCGTGCCGGCAAGACAAACAGACAATGTTAGACGACCCAATTTGCAAGAACATTTGCGTGAAGATTGACTACAATGGGAAGAGTCTGACCGTGCCAATCAACAACAAATGCCCGGAATGCCCGCCTACCCATGTGGATTTGTCGATTGACGCCTTCAACTATTTGGAGCCACGTGGGGGCGTTGTGGGCAAAGCGACGGGCGCTACGCTCACCTATTTAAAATGTC
Protein sequence:
AQMVLADVTASLKTSNTWNGGGQYVPNFKNNAGSQIVCSVKFSLTPKSGTSIVSIWGANAVSGSSNEYTLADNADIAPGATNTNAGVNINGNGAPTLKLIEAKYYINGICGGAPSGSCMGCLSSTSTDGPINQNLNKPFTNSVFTFYGASGRGACGLDAGVPKMSAAGSGNLFKSDGQWKDACRQDKQTMLDDPICKNICVKIDYNGKSLTVPINNKCPECPPTHVDLSIDAFNYLEPRGGVVGKATGATLTYLKC
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26515.8 256 8.27 -0.185 26.76
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.