Effector profile
PlantPEAD ID: PlantPEAD13691 Uniprot ID: C6CIB1 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 556 Pathogen type: Bacteria
Species: Dickeya chrysanthemi Strain: strain Ech1591 Other name: Pectobacterium chrysanthemi,Erwinia chrysanthemi
Gene name: NCBI Gene ID: CP001655
Entry name: C6CIB1_DICC1 Protein name: Rare lipoprotein A
DOI:
Gene/Protein information
Gene sequence:
TTAGGGCAGTTGGACTTTACCGGTGATCAGATAGGCTGACGACGTACTGTCCGACATCGGCGGTAACGTATCGCTTAATATATTGCCTTTAATATCGGTGAATTCGATTGGAATATCATTTTTACCCACAAACTCCAGAATGAAATGATTGTAATCCGTTTTCGGTGCGCTAACCCATTGCGTACCTCTTAAATACTTCATTTCAATAATCGGGTATTTAACATTACGGAATTGTACCGCCGCCCAATAAGGATTGGAGCCTTCTTTAACCCGGTATACAACATTACCACTCACCGGTGCTTTTACCAATTCCCATTGGATATTGATTTTCCCATCCTGCAAGTTACCAATTTTTTCGAAAGCATTGAATGATAAATCCAGTGCACAATCACCGCCTTCAGGGTACAAATCCGTAACATACACGATAGTGCTTCCCTTAGGGCCGGTAACTTTTAGATAAGCACCGGCGAGTGCCGCCTTAACGCCTTTATAATCCAGTTGCGCCCTGTTTAATGCGGTAATCTCCATATTGGAAGGAATCGGATCTAATAATAAAGCACCGCCGGAATAGCCTGATCCGGTAGCTGTCGCATATCCATAACAGATATCACCGAGTTCCCAGGCGGCCTGGGCTTGTTGAGTCAGAGGGAGGAATAACACTGAGGATGCTAATAAAACACTTTTGAGCTTCATCAT
Protein sequence:
MMKLKSVLLASSVLFLPLTQQAQAAWELGDICYGYATATGSGYSGGALLLDPIPSNMEITALNRAQLDYKGVKAALAGAYLKVTGPKGSTIVYVTDLYPEGGDCALDLSFNAFEKIGNLQDGKINIQWELVKAPVSGNVVYRVKEGSNPYWAAVQFRNVKYPIIEMKYLRGTQWVSAPKTDYNHFILEFVGKNDIPIEFTDIKGNILSDTLPPMSDSTSSAYLITGKVQLP
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
25186 231 5.87 0.006 21.85
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.