Effector profile
| PlantPEAD ID: PlantPEAD13887 | Uniprot ID: H1W5B0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 759273 | Pathogen type: Fungi |
| Species: Colletotrichum higginsianum | Strain: strain IMI 349063 | Other name: Crucifer anthracnose fungus |
| Gene name: | NCBI Gene ID: CACQ02010004 | |
| Entry name: H1W5B0_COLHI | Protein name: Ran-binding protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGTCCGGACCGCCGCTGAAATGAGAGCCGCGTCGGAGACAAAGAAGAGCAATGGCCACAACATCGACATCAGCGCCCAGGCAATGGATCTTGATGCTAATGGCACCGAGAATGGGGCCTGGGATCAAATGGACACGGAAGACTCCACCGAGGTCCCTCTCGACATCAACGAGCTCGAGATTGCGACTCTACAGTACGGGCAGGAGCTTCACGCCGAGTTCAAGGACGACCCCAGACGAGAGGTCACCAAGCACTTGGCGAACATTTATGCCCTTCTTGCGTATGCAAACCCTCTGAAAGAGAAGGACGTCGTCCACCTACTCGACAGAAAAGGCCGTCTGGCAGTCGCAGAGGAGCTCAACTCGGCGATTCTTTTGTCGTTGGGCAAATCCTCTCGTGCGGCTCTCGAAAAGATTTACGCTCAGACGAGCGTCCTGTTGGATGACCTGCGGGAAAATGGCGGACCAGGCGCCTTCGTCTCTTTACAGGACGTCATTGAAGAGATACCGAAATCTCAGCCTTTTTAG
Protein sequence:
MVRTAAEMRAASETKKSNGHNIDISAQAMDLDANGTENGAWDQMDTEDSTEVPLDINELEIATLQYGQELHAEFKDDPRREVTKHLANIYALLAYANPLKEKDVVHLLDRKGRLAVAEELNSAILLSLGKSSRAALEKIYAQTSVLLDDLRENGGPGAFVSLQDVIEEIPKSQPF
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19275.6 | 175 | 4.67 | -0.423 | 42.56 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013144,IPR024964
Pfam: PF10607
SMART: SM00757
KEGG:
PRINTS: