Effector profile
| PlantPEAD ID: PlantPEAD13965 | Uniprot ID: A0A023ND02 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 31243 | Pathogen type: Nematoda |
| Species: Globodera rostochiensis | Strain: | Other name: Golden nematode worm, Heterodera rostochiensis |
| Gene name: D406 | NCBI Gene ID: KF963528 | |
| Entry name: A0A023ND02_GLORO | Protein name: D406 protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCTTCTCCCCCTGCAGCACTGTTCTCCGTCCTCGCAATTGTCTGTTTGCTGTGCAAATGTTGCATTTCGGCCCCACAATTCCCGTGCTGTCCGGGCAGTCAGCAGGTGGTTTCTCTGATGGCCTCCCATGTTGATGCGTTCGCATCGACAATGACTGAATCGGCGGCTTGCAAAAATGCCAATGATGTCGAGAATGCCGTCAAAAGTGCACTGAGCTCAATGGGCAGATGCCCTAATGGCGGTGGTGACCAAATTGTGCATGAAATTGATGCGCAACTTTCTTCAACAGACGGATGCGCGTACAGTCTCAGCTTCGTCGAAGCCATGTTCGAGTTGGCCCGTTCAGCTGCAGACCATATTGGCAATACATCATCAGTCTGGGCCAATTTGAGTCAAACGTTTGGAAAACAAATTGGCGCCATTCACAACATTGGCAATGTGCACAACATTCACATTACGGACGTGTTTTTCAACAAGCCGAGCAAAGGAAATGATGCACACCAAAATGTGCCACACCCGAACAATGTGATTTCCAGCCCTGGCGATTCCGGCTCGCACAAGCTCTGA
Protein sequence:
MSSPPAALFSVLAIVCLLCKCCISAPQFPCCPGSQQVVSLMASHVDAFASTMTESAACKNANDVENAVKSALSSMGRCPNGGGDQIVHEIDAQLSSTDGCAYSLSFVEAMFELARSAADHIGNTSSVWANLSQTFGKQIGAIHNIGNVHNIHITDVFFNKPSKGNDAHQNVPHPNNVISSPGDSGSHKL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19743.2 | 189 | 5.92 | 0.019 | 53.64 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: