Effector profile
| PlantPEAD ID: PlantPEAD14383 | Uniprot ID: A0A1Q9R4B5 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 303 | Pathogen type: Bacteria |
| Species: Pseudomonas putida | Strain: GM4FR | Other name: Arthrobacter siderocapsulatus |
| Gene name: LgrD_3 | NCBI Gene ID: MKZO01000025 | |
| Entry name: A0A1Q9R4B5_PSEPU | Protein name: Linear gramicidin synthase subunit D | |
| DOI: | ||
Gene/Protein information
Gene sequence:
GTGCAAGAGCTGCTTGACTCCGTGAAATCCCTGTCTGCCCGTGAACGCAAGGCGCTGGCCGCCTTGCTCAAGCGCCAGGGGGTGAATCTGTACGGCGTCACGCCGATCTTCAGGCGCGAGCTGGAGGCCAGCGCTGCGCTGTCCTACGCCCAGCAGCGCCAGTGGTTTCTCTGGCAACTGGAGCCGCACAGCAGCGCCTACAACATCCCGGTGGCCCTGCGCCTGACCGGGGTGCTGGACGTCGCGGCGCTGGAGGCGGCGTTCGCCGGGCTGGTGGCCCGCCATGAAACCCTGCGCACCACCTTCCGCCAGGACGGCGAGCAGGCGGTGCAGGTGGTGCATGAGGCGCAGCCGTTCCAGTTGCCGGTGGAGGAGGTCGCCGAGGCGGACCTGCAGGCCCGGGTCGGCGCCGAGCTGCGTGCGCCGTTCGACCTGCAGGCGGGGCCGCTGCTGCGGGTTCGCCTGCTGCGGGTGGGCGCCGAGGAGCATGTGCTGACCGTGGTCCAGCACCATATCGTCTCCGATGGCTGGTCGATGCCGATCATGATCGACGAGCTGGTGCGCCGCTACGACGCTCATCGCTGCGGGCAGCCGCTGCATCTGCCGGCGCTGCCGATCCAGTACGCCGACTATGCGATCTGGCAGCGCAACTGGATGGAAGCCGGGGAACAGGAGCGCCAACTGGGCTACTGGACCGGGCAACTGGGTGGTGAACAGCCGGTGCTGGAATTGCCCACCGACCGTCCAAGGCCGCTGGTGCAGAGCCATGCCGGCGCGCGCCTGGACATCGACCTGCCGCCTGCATTGGCGCAGCAGCTCAAGGACCTGGCGCGGCAGCAGGGCGTGACCCTGTTCATGCTCCTGCTGGCGTCGTTCCAGACCTTGCTGCACCGCTATTCGGGACAGGCCGATATCCGTGTCGGCGTGCCCACCGCCAACCGTAACCGTGCCGAGACCGAAGGGCTGATCGGCTTCTTCGTCAATACCCAGGTGCTCAAGGCCGAATTCAGCGCAGACGCGACCTTCGGGCAACTGCTGCAACAGATCAAGCACACCGCCGTGCAGGCCCAGGCCCATCAGGACCTGCCGTTCGAACAACTGGTGCAGGCCTTGCAGCCGGAGCGCGACCTGAGCCGCAGCCCGCTGTTCCAGGTGCTGTTCAACCACCAGACCCAGGCCCAGGGCCAGGCCCGGCAGTTGCCGGGGCTGAGCGTGGAGAAGCTGCAGTTCGGCCAGCACACCGCGCAGTTTGACCTGACCCTGGAAACCCTCGAACGCGACAGCGGTATCGGCGCGGCGCTGACCTATGCCACGGCGTTGTTCGACCCGGCCACCGCCGAGCGTTTTGCCCGGCATTGGCGTCATCTGCTGGAAGGCATCTGTGCCAATGTCGGGCAACGGATTGCCGAACTGCCCTTGCTGGATGCCGGCGAGCGCCAGCGCATGCTGGTGGACTGGAACCGCAGCCAGCTCGACTATCCCCGCGAGCAGTGCCTGCCAGCGTTGATCGAGGCCCAGGTTGCTGTTACGCCGGATGCAGTTGCATTGGTGTCCGCCGATGCATCGCTGAGTTACGTGCAACTGAATGCCCGCGCCAACCAGCTGGCGCACAAGCTGCGTGAGCTGGGTGTCGGCGCGGATGTGCTGGTGGGCGTGGCGCTGGAGCGGGGGCCGGACATGGTCGTCGGCCTGCTGGCGATCCTCAAGGCCGGTGGCGCCTATGTGCCGCTGGACCCGGACTTCCCGCCGGACCGGCTGACCTACATGATGGAAGATAGCGGACTGAAACTGCTGTTGAGCCAGTCTTCCCTGGTCGACCAACTGAGCATTCCGCCTGCCGTGCAGACCCTGTGCTTGGATCAGGGCGGCGATTGGCTCGAGGGCTACAGCCGCGAAAACCCGCCGGCCTCGGCCGGCCCGGAGAACCTCGCCTATGTGATCTACACCTCCGGCTCCACCGGCCTGCCGAAAGGCGTGACCATTCACCACCAGGCCCTGGTCAACTTCCTCTGCAGCATGGCGGAAAAGCCAGGGCTGACGGCGGCTGACCGGGTGCTGTCGCTGACGTCCCTGTCCTTCGATATCGCCGGCCTGGAGCTGTACCTGCCGCTGATCCGCGGTGCTGCGGTGGTCCTGCTCAAGACCCACCAGAACAAGGACCCGCAAGCCCTGCTGCAGGTAATCGCCGAGCAGCAGGCCAGCGTGATCCAGGCCACACCGTCGAGCTGGCGGATGATCCTCGACGCCGCACCAGCCGGTGCATTGAAGGGCAAGACCCTCCTCTGCGGCGGCGAGGCGCTGAGCGCTGAACTGGCCCAGCGCCTGATCGACCAGGCTGGCCACGTGTGGAACGTCTACGGCCCGACCGAGACCACCATCTGGTCGGCCCGGCATTACCTGACCCGCGCCGATGACGTCTGGTTGGGCAAGCCGCTGGCCAACACGGCGCTGCATATCGTCAGCGATGACTTCGATGTGCTGCCGGTCGGTGCCCGGGGCGAGTTGCTGATTGGTGGCGACGGCCTGGCCCGTGGTTATCACCAGCGTCCTTCCCTGACGGCGCAACGCTTCGTGCCCGATCCGTTTTCCAGTACCGGCGGGCGGCTGTACCGCACCGGTGACGTGGCCCGCTACCGCGCTGATGGTGTGATCGAGTACGTTGGCCGTCTCGACCACCAGGTGAAGATTCGCGGTTTCCGTATCGAACTGGGCGAGATCGAGGCGCGTCTGCTGGAGCATCCGGCGGTCCACGAAGCTGTAGTGATCGATATCGATCACCAGCTGGCGGCCTACCTGATCGCGGAACAGGACACCCCGGAGCTGCGCAGCGCCCTCAAGGCCCACCTGAAAGCCGGCTTGCCCGATTACATGGTCCCCAGCCATTTCACCTGGCTGGACAGGATGCCCCAGACCCCCAACGGCAAGCTCGACCGCAAGGCCCTGCCCAAGCCCGATGCCAGCCAGGCGCAGGGCGAACACGAACCGCCGCGCAACGAGCGTGAGCGGCAACTGGCGCAGATCTGGAGGGACGTGCTCAAGGTCGAGCGGGTCGGGCTCAAGGACAACTTCTTCGCCCTGGGCGGTCACTCGTTGCTGGTGATCACCCTGGTCAGCCGCTTGCGCGAGGCCTTCGAGACCAGCCTCAGCCTGCATGATTTCCTGTTGCTGGAAACCTTCGAGGACCTGGCGGACTTCATCGCTGCGGGCGAGCGCCGGGTGAGGAACCCGGTGGTCAGCATGAACATCAGTGCCGGCGACAAGGCCCCGCTGTTCTGCCTGCCGCCCGGTGGCGGCGGTACCTACGCCTACTATCCGCTGGCCGGGCACCTGGGCCCGCAGCGCAGTGTGCTGGGGGTGGTCAACAAGAGCTATGTGGTGCCGGGCTGGAAGGAAACCTCCTGGGACGACATGGTCGGCTACTACGTCGAGCAGATCCGCAAGGTGCGCCCGCACGGGCCCTACAACCTGCTCGGCTGGTCCCTGGGCGGGGCGCTGGCCATCGAGGTGGCGCATGTCCTGGAAACCTCCGGCGAGACCGTGGGCTTCCTCGGGCTGGTGGATACCCACCTGCCCAGGGGCGAACAAGTGCTGGCCAATGAGGATGCCGAGGAACCTGAAGCCGGGCCGTGGGAAGGGCTGGTGCGCAGCCTGCTGGCGTTCGCGCCGGGGATTGGCGAGGCGGTGGTGCTGGACCTGATCGAGGAAGGCACTGCGCGCTTTGAGGATCCGAAGGAAGCGGCGGATTGGGTGATGGTCCAGGTGGCTGGGATCAGCGGCACGGACATCGAGGCGCTGCGGGCGATTCACCGGGATATCGGGGTGCAGGCGGAGATCGCCAGCGGCTATGAATTGCTCAGCGCGAACATGGCGCTGGGGCAGGCGTTCGTGCTCAAGCCGCTGCGGGTCAAGCCGCATTGCTGGTGGGCCGGTGGCAGTCGCACTGAAGAGCAGGTGGCGGCGGCGCAGGTGCTGTTGAAGGCGGGTTGCGGGCTGGAGGAGGTCTGGTCGGCGACGCTGGCGGGGGTGAAGCATGATGATGTGGTGTTGGCGCCGGAGCTTTTGACTGCTGTTTCGCAGCAACTCGAAGGCATGGAGTAA
Protein sequence:
MQELLDSVKSLSARERKALAALLKRQGVNLYGVTPIFRRELEASAALSYAQQRQWFLWQLEPHSSAYNIPVALRLTGVLDVAALEAAFAGLVARHETLRTTFRQDGEQAVQVVHEAQPFQLPVEEVAEADLQARVGAELRAPFDLQAGPLLRVRLLRVGAEEHVLTVVQHHIVSDGWSMPIMIDELVRRYDAHRCGQPLHLPALPIQYADYAIWQRNWMEAGEQERQLGYWTGQLGGEQPVLELPTDRPRPLVQSHAGARLDIDLPPALAQQLKDLARQQGVTLFMLLLASFQTLLHRYSGQADIRVGVPTANRNRAETEGLIGFFVNTQVLKAEFSADATFGQLLQQIKHTAVQAQAHQDLPFEQLVQALQPERDLSRSPLFQVLFNHQTQAQGQARQLPGLSVEKLQFGQHTAQFDLTLETLERDSGIGAALTYATALFDPATAERFARHWRHLLEGICANVGQRIAELPLLDAGERQRMLVDWNRSQLDYPREQCLPALIEAQVAVTPDAVALVSADASLSYVQLNARANQLAHKLRELGVGADVLVGVALERGPDMVVGLLAILKAGGAYVPLDPDFPPDRLTYMMEDSGLKLLLSQSSLVDQLSIPPAVQTLCLDQGGDWLEGYSRENPPASAGPENLAYVIYTSGSTGLPKGVTIHHQALVNFLCSMAEKPGLTAADRVLSLTSLSFDIAGLELYLPLIRGAAVVLLKTHQNKDPQALLQVIAEQQASVIQATPSSWRMILDAAPAGALKGKTLLCGGEALSAELAQRLIDQAGHVWNVYGPTETTIWSARHYLTRADDVWLGKPLANTALHIVSDDFDVLPVGARGELLIGGDGLARGYHQRPSLTAQRFVPDPFSSTGGRLYRTGDVARYRADGVIEYVGRLDHQVKIRGFRIELGEIEARLLEHPAVHEAVVIDIDHQLAAYLIAEQDTPELRSALKAHLKAGLPDYMVPSHFTWLDRMPQTPNGKLDRKALPKPDASQAQGEHEPPRNERERQLAQIWRDVLKVERVGLKDNFFALGGHSLLVITLVSRLREAFETSLSLHDFLLLETFEDLADFIAAGERRVRNPVVSMNISAGDKAPLFCLPPGGGGTYAYYPLAGHLGPQRSVLGVVNKSYVVPGWKETSWDDMVGYYVEQIRKVRPHGPYNLLGWSLGGALAIEVAHVLETSGETVGFLGLVDTHLPRGEQVLANEDAEEPEAGPWEGLVRSLLAFAPGIGEAVVLDLIEEGTARFEDPKEAADWVMVQVAGISGTDIEALRAIHRDIGVQAEIASGYELLSANMALGQAFVLKPLRVKPHCWWAGGSRTEEQVAAAQVLLKAGCGLEEVWSATLAGVKHDDVVLAPELLTAVSQQLEGME
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 149646 | 1365 | 5.38 | -0.084 | 36.29 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR010071,IPR029058,IPR036736,IPR025110,IPR045851,IPR020845,IPR000873,IPR023213,IPR001242,IPR020802,IPR009081,IPR006162,IPR001031
Pfam: PF00501,PF13193,PF00668,PF00550,PF00975
SMART: SM00824
KEGG:
PRINTS: