Effector profile
PlantPEAD ID: PlantPEAD14447 Uniprot ID: A0A6A3NF30 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 129364 Pathogen type: Oomycota
Species: Phytophthora rubi Strain: SCRP249 Other name:
Gene name: NCBI Gene ID: QXFU01000106
Entry name: A0A6A3NF30_9STRA Protein name: Linear gramicidin synthase subunit D
DOI:
Gene/Protein information
Gene sequence:
TCACCACTTGGCCGTGTACGTGGCGAGGAGCGTCTGGTTGACTGTCGGACAGGAGATGCCGGCGGAATGCAATAGCTCGGCCGAGAGCGTGGAGTCGAACACCTTGTCGCTCTGGAAGTAAATCTCGAAGGATTCGATCCCGGCGGCCAATTTCTGCAGCTCCAGTGGTGCGTCCTCCTTTGCCGACGACTGCTGCAGACTGCGCTTCCACTCCGAGTACTCGACTGCGACCAGCGACTTGGTGCTCAGCGCAGCAGTGAAGAACTGGAAGAACGCGTCGCTCGTGACGGGAAGTGCCGGGTTCTGGATGTGCAGCGTCTGGCCAAGCGCCTCCACCGGACGCAACGCTGCGAAGTGCACGATGGCACGCGCGGCGTAGTCCACTGGGGTCATGTCGAAGTACCAGTCGGAGCGAGCGGGTACAGTCCCGAGACTCGCGCAGCCCTTGAGCAATAGGTAGATGAAGTCGCTGGCATTCCATTTGCCTGTGAGAGACGACGGAGCCATGTTACCCGGCCGCAGAATCGACACCGGCAGGCCGCGCTGGGCCGCCTCGTGACACATCTGCTCGGCCACCCACTTGCTCTGCGCGTAGCCATTCTCGAGCTGATCCGACAGCTCGCTAAGGTCAGCGGTCTCGGAAAACTTGGACGCCGCTAGTGTGGACGGGAACACGCCGTTCGTCGAGATGTAGTGGACGGGCTTCACGCGGGTCTTCGCCAGGCCGTTGGTCACCGCAAGACGCAGCACCTCCTGCGTGCCCAGCACGTTCACGCTTTTCAGAGCCGAGTAGGGCTTCACCAGGTTGACGTCTGCACCGTTGTGCAAGATGGCATCGATCTCAGTTGCCAGCATCTTGAAGCTGTCCCCGTCCAGACCTAGCAACGGCTGCGCGAGGTTGCCCGGGACAGGCACCACTCGGTCCTCCAGATCAAACTTCTGTGCTTCATCAAGCAGGGAGAAATCCTTAAGCGCCTTCTTGATGCGTGCCATCGCCGCATCTTCATCGGCCGCACGGACTAGGCAGAATACGATACTCGTTGAGTCCTTCAGCAGGGCGTGCAGGAGGTGCACGCCAAGGAAACCAGTTGCCCCCGTCAAGAAGATGTTGCGAGGAGAAAGGCTCACCATTTCCACACGGTAGCGACTGTAACCAGCCTTACGCGTAGGGGCCGGGTAGATTGACGCATCCAGCACAGCTTCCAATGGAAGAGCCACCTTCTTCTCCGTTTTTACCGGAGCAGCATCGCTCTCACCCGTTTCACCTATCGACTGATTGATGCGCGACGCGATGGCACACAACTCGGGCGAGGACAGAATGTCCGCCAGCGTCAATTGAATCCCGAAGGTATCGCGGATACTCGACACCAGTCGGGTTGAAAGCAAACTGTGGCCTCCAACATCAAAGAAGCTCGCTTCGCGGTGCAGTACGCTGTCGTTTTCGAGACGAAGGAGGTCCGACCAAATGGACGCAAGCTTCTTTTCGGTATCTGTCTGAGGCAGATTCTTCGGGTCCACTGACAGATCGATCGATTCGTTGCGTAGCTTCTTGGCTTGCTCAATCGAAGGCATCTTCTTACGGTCCAATTTGCCACTTGCGCTGTTAATCGGGAGCGCATCGAGCTGGACGAATACAGACGGGATCGCGTAGTGTGGGAGTTTTTCCTTCAGAAACTCACGAAGATTCGATGCGCTAGGCACCTTTTCCCAGTCCTCTGGCACGATATAGGCGACTAAACGCTTATCCTCGCCTTCGTCACCTTCCGTGAGCACCACTGACGTCGACACCAGAGGATGTTGTGCCAAGGCTGACTCGACAGCACCTAGCACCACGCTGTATCCACGAATCTTCACCATGAAGTCGCAACGTCCTATCAGTTCAAGGTGGCCATTTGGCAAGAAGCGCGCACGATCGCCGGTCCTGTACACAGTCTCTCCAGGCACGACGTGTTTGAGGAAGCGCTGCGCTGTCTGCTCCGGGCGGTTGAGGTACCCGATAGCCAGACATGGACCACCAATATACAGCTCCCCAGGCACCCCCACGGACACAGGCTTGAAATCATCATCGAGCACGTACGCCTTCACGTTGGGCATGACCTCGCCACAAGATGCATACTTCGTAGACAGCGAGTTGTCGAAGTCGCTCATTGCTGCCAGATCAACTGCACTCACATCATGACACTCGGAGACGCTGTAAAGATTCTGCAGCTCGCATGTAGGGAAAAGGCGAACAAAACGATCGCGCAATTCCAGCGTCACCACCTCACCGCAAAGCCACACCAACCGCAACTTCGAAAGCTTTTGCAGCAGCACCTCCTTTGAGCACGTGTCAAGAATCAACTGCAGCAGTGACGGTGTGAAAAGGATGCGCGTGATACTGTGAGTGTGAAGGTAGTCCACGAGCTTGACGGGGTCGTAGATGGTGTTGTCAGGGATGACGTATAGAGGACGATTTCCAAGCATCGGACGCAAGAGTTCCCACACGAAGAAGACGTGGCAGGCCACTCGATCATCTTCTTTATAGGGGCAGTGAGTGAGACGCCAGTCGTAAGAGTGAACGGCGCCGCGATGCGGACAGCAAATGCCCTTCGGCACGCCAGTAGTTCCCGAAGACATGACGACATAAGCCAGATCGTCTGGGTGTGTCCGCGTGCGATCCAACGGCATCGATGGGATATTTTGCTGAGCCAGCGACTCAAGCCAACCATCATCCAGCTCATGTGCTTGCTGCCACGCCGGCAGACGGCTGCGGAACTTCTTCTTGGTCAGCACAATGATCGGCTTGGACTCCTCCATGACGCGCTCCAGTAGATCCGGCGGGTACACGATCTCCAGCGGCATGTACGCGCCGCCAGCTTTCAGCGCCGCGATGTACGCCACGACAAACTCGATGCAGTGCTCCATAAAGATGCCCGAGATGCAGCCAGGGCGTACACCAGCGCGGAACAGACAGTCAGCGAGTCGTTCACTCTGCTCATCCACTTCACGGAACGTCAGCGTCTTGCCCTCGTAGAAGACCGCGACTGCATCAGGCGTCCGCTTGGCCGCCTCCGCGAACATGTCGTGCAAGCATTTGTCCGCCGGATACGGCCCCCTCCTGGCGTTCAACCCGTCGACGAGCGTGCGTGACTCCATCACGACAATTGCACTCACAGCTTCCAACTTAGCGGTGAGTGACTTGGCGAACGCCTCCTGGCTCTCCGCACTCGTGAGATAGAAGTGTCCACCGGGGAAGAGCTTGACGTCGAACTCGCTGCCTTCTCCACACACGTCCTGCCACTGCATCAACGAATCCTTCGACGCCGTCGGATCTTCCGAGCCACCGAACGCCGTCACGTCCGCGTGGATCTTCACCTCCTTCTGCTGCTTGAGCCACTGCACCACGCGATTGTGCAGCTGCAAGTCGGCGCGCAGAGCTGCCAGCAGCTTGTGCTGCTGCTCGGGGATGGCCAGCAGCTGCTGGTCGGTGCCTCCCCATTGCTGCAGCAACTTGAGCAGCTCTGCATCCTCCTGCGCATCGTCGTACAGCGTCCAGCTGGCCCCCGAGAGGAAAACGTGGCGGGGTGTTGACAACTGACGCTGCTCCAGGTACAGCGCGAGCACGAGCGCCACCAGCGCCCCCAGACTGTGGCCCGCCAGCACGAACGGCTTGCCGAAGAAGCCGCCGCTCAGCTGCGTGCAGATGGCGGCCACGAGCTCCGCGGCGTCGCCCTCTGGCGTCCAGTCGACGCCCCACAGCTCGACGCTTAGCCCCGCCGCGCGGAAGCTCTTGCCCCACTCCAGCGCCAAAGCGCGCGAGGTGCCGCCCGCATGGGGAAGCACCAGCACGCGCAGCGGAGCCGCCTCCGCCTCTTGGAAACACGTCGCAGTCACGCGCGACGCCAT
Protein sequence:
MASRVTATCFQEAEAAPLRVLVLPHAGGTSRALALEWGKSFRAAGLSVELWGVDWTPEGDAAELVAAICTQLSGGFFGKPFVLAGHSLGALVALVLALYLEQRQLSTPRHVFLSGASWTLYDDAQEDAELLKLLQQWGGTDQQLLAIPEQQHKLLAALRADLQLHNRVVQWLKQQKEVKIHADVTAFGGSEDPTASKDSLMQWQDVCGEGSEFDVKLFPGGHFYLTSAESQEAFAKSLTAKLEAVSAIVVMESRTLVDGLNARRGPYPADKCLHDMFAEAAKRTPDAVAVFYEGKTLTFREVDEQSERLADCLFRAGVRPGCISGIFMEHCIEFVVAYIAALKAGGAYMPLEIVYPPDLLERVMEESKPIIVLTKKKFRSRLPAWQQAHELDDGWLESLAQQNIPSMPLDRTRTHPDDLAYVVMSSGTTGVPKGICCPHRGAVHSYDWRLTHCPYKEDDRVACHVFFVWELLRPMLGNRPLYVIPDNTIYDPVKLVDYLHTHSITRILFTPSLLQLILDTCSKEVLLQKLSKLRLVWLCGEVVTLELRDRFVRLFPTCELQNLYSVSECHDVSAVDLAAMSDFDNSLSTKYASCGEVMPNVKAYVLDDDFKPVSVGVPGELYIGGPCLAIGYLNRPEQTAQRFLKHVVPGETVYRTGDRARFLPNGHLELIGRCDFMVKIRGYSVVLGAVESALAQHPLVSTSVVLTEGDEGEDKRLVAYIVPEDWEKVPSASNLREFLKEKLPHYAIPSVFVQLDALPINSASGKLDRKKMPSIEQAKKLRNESIDLSVDPKNLPQTDTEKKLASIWSDLLRLENDSVLHREASFFDVGGHSLLSTRLVSSIRDTFGIQLTLADILSSPELCAIASRINQSIGETGESDAAPVKTEKKVALPLEAVLDASIYPAPTRKAGYSRYRVEMVSLSPRNIFLTGATGFLGVHLLHALLKDSTSIVFCLVRAADEDAAMARIKKALKDFSLLDEAQKFDLEDRVVPVPGNLAQPLLGLDGDSFKMLATEIDAILHNGADVNLVKPYSALKSVNVLGTQEVLRLAVTNGLAKTRVKPVHYISTNGVFPSTLAASKFSETADLSELSDQLENGYAQSKWVAEQMCHEAAQRGLPVSILRPGNMAPSSLTGKWNASDFIYLLLKGCASLGTVPARSDWYFDMTPVDYAARAIVHFAALRPVEALGQTLHIQNPALPVTSDAFFQFFTAALSTKSLVAVEYSEWKRSLQQSSAKEDAPLELQKLAAGIESFEIYFQSDKVFDSTLSAELLHSAGISCPTVNQTLLATYTAKW
Protein structure:
NONE
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
142513 1294 5.63 -0.029 39.95
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.