Effector profile
| PlantPEAD ID: PlantPEAD15156 | Uniprot ID: C9ZCB0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1930 | Pathogen type: Bacteria |
| Species: Streptomyces scabiei | Strain: strain 87.22 | Other name: |
| Gene name: | NCBI Gene ID: FN554889 | |
| Entry name: C9ZCB0_STRSW | Protein name: Putative type I polyketide synthase component | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAGGCCCGTCGCCATCGTCGGCATCGACTGCCGGTTCCCGGGGGCGCCCGACACGGCCGCCTACTGGGACATGCTGATGCGCTCCGGCGACGGAGTGGAGAAGGTGCCCCGGCAGCGCTGGGACGCCCGCGCATTCCACTCCCGCGCCGGAGCGGAAGGACACTCCAACACCACCGAGGGCGGGTTCATCTCCGACCCGGACGCCTTCGACAACGAGTTCTTCACCGTCTCCCCGCGCGAGGCGGCCGCGATGGACCCGCAGCAGCGGCTGCTGCTCCAGTGCGCCTGGCGCGCCGTCGAGGACGCCGGGGTCGCCCCGCAGCGGCTGGCCGGCACCAACACCGGTGTGTTCGTGGGCATCATGGGCAACGAGTGGGCCCACCTGCACATGACCGACTACGCCCAGGTCACCGCCCAGCTCGGCTCCGGCAACGGCTACTGCATGACCGCCAACCGGGTCTCCTACCACCTCGACCTCAAGGGGCCGAGCCTGGCGGTGGACACCGCCTGCTCCTCCTCCCTCGTCGCCGTCCACCTGGCCTGCAACGCCCTGCTTGCGGGGGAGTGCGACACCGCCATCGCCGCCGGGGTCAACGTGGCGCTCACCCCGGCGCTCGGCATCTTCTACACCCAGGCCGGGCTGTCCGCCCCCGACGGCCGGTGCAAGCCCTTCAGCGCCGACGCCGACGGCATCGGCCGGGGCGAGGGGGTCGGCGCGGTGGTGCTGCGCCGGCTGGAGGACGCGATCGCCGACGGCCAGCCGGTGTACGCGGTGATCCGCGGCACCGCCGTCAACCAGGACGGCCGCAGCAACGGCATCACCGCCCCCAACCGCTGGTCGCAGCAGGAGGTGCTGGCCGCCGCCTACCGCCGGGCCGGTGTCGAGCCGTCCGACGTCGTCTTCACCGAGGCCCACGGCACCGGCACCGTCCTCGGCGACATGATCGAGACCAAGGCGCTCGGCCAGCTGCACGCCGGCCGCTCCGGGCGCCCGCTGGCCCTCGGTTCGGTCAAGGGCAACATCGGGCACACCGAGGGCGCCGCGGGCATCGCCGGGCTCATCAAGGTCGCCCTGTCCCTGCACCACAAGACGGTCCCCGCCAGCCGGTTCGCCGCCCGCGAGAACCCCGCGCTGAAACTCGCCAAACTGGGGATACGGCTGCTCAAGGCGCCGCTGCGGCTGCGCTCGGGCCCCGCCATCGGCGGCCTGAGCAGCTTCGGGATGGGCGGCACCAACGCCCACGCCGTCCTGGAGTCCGCGCCCCCGTACGCCGCCCGCCCCGAGGGGGGAGACCCGGAGTCCGGGAGCACCGGCCGGTCCACCGGCGCCACCGGACTGGGGGCCGGGGTCTTCACCCTGACCGCCCCCTCGACGGCAGCCCTCCGCCGCAACCTGCTGGTCCAGGCCGAGGCGCTGGAGAAGCGCAGGGTGCCGGCGGGCCCGCTGTCCTGGAGCAGCAACCGCACCAAGACGGGCCACCGCTACCGCTTCGCGGTCCCCGCCCGGGACACCGGCGAACTGGCCGCGACCCTGCGCGAGGCCGCCGGCGACGAGGACCTGCTGGCCCGGCTCGTCGGCAACGCGGCGGGCAAGCCGCAGGTGGCACTGCTGTTCACCGGCCAGGGCTCGCAGTACCCGGCGATGACGGCGCGGCTGTACCTGCAGTCGCCGCTGTACCGCCGCTTCCTCAACGAGGCCGACGAGGCGCTCGCCCCGCACGTCGGCGGCTCGGTGCGCGACCTGCTGCTCTCCGGAGACGAGGCCGTGCACCGCACCGGCTGGGCCCAGCCCGCCCTGTTCGCCGTCGAGTACGCCGTGGCGGCCAGTCTCGGCGAACTCGGGGTGCCGCAGGCGCTGCTGCTCGGCCACAGCGTCGGCGAGTACGCGGCCGCCGTGCTGGCCGAGGTGTTCCCGCTGGAGCAGGCCGCCCGGCTGATCGCCGCCCGGGGCGCGCTGATGGAGCAACTGCCCGAGGGCGGCGGCATGCTCGCCGTACGGGCGCCGCTCGCCGAGCTGACCGAACTGGTCGACTCGGAACCCCTGGTCGGGGTCGGCGCGGTCAACGGCCCCCGGGCCACGGTCCTGTCCGGGGACCTCGCGGCACTGGGCCGGATCGACGACGAGCTGACCCGACGGGGCGTCAGGACCCGGCGCCTGGAGGTCTCGCACGCCTTCCACTCGCCGCTCATGGACCCGATGCTCGACCGGTTCGCCGCGCTCGCGGACGAGACCGGCGGCGGTGTGCCCAAGCTCCCGGTGTACTCCACCGTGCGCGGGCGGCTGCTGGAGGCCGAGCCGATGGACGCCAAGTACTGGACCGAGCACATCAGCGCCCCCGTCCTGTTCGGCGACGCGATGAGCCGGCTGCTGGAGGCGGGACCCACGCACCTGGTGGAGACCGGCCCCCGCCCGGTCCTCAGCCGTATGGCACGCTCCCTGCGCTCCGCCGCCGGGGCCGGGGTGCACTCCGTGGCCCCCGTGTCCGGTGAGGAGGCCGACGGCCGCACGTTCGCCGAGGCGCTGGCCGAACTCTTCCGCAGCGGACTCGACCCCCGCTGGGACGCCGTCTACCCGCAGGAGGAACGCCAGCCCCAGCGGCTCGCGCCCTACGCCTTCTCCGACGCGCACCGGTTCTGGGCCCGCACCCCCGTACGGGCCGCCCCGGCGGCGGACCTCAGCGTCGTACCCGACCGGGCGGACACCGCGCCGCACCAGCGGGAGCAGGAAAGTGCGCCCGGACACGGCGCCGTGCTCACCGCCGTGCTGCCCGCCGCGCCGGAGGACGTGTCGACGGCCCCGGTGGCGCGCGCCGTCATCGAGGCCGTCGCGGAGGTCGGCGGCTACGCCACGGACGAGGTCTCGCGGCAGTCCCTGCTCTACGAGGACCTGGGCTTCGACTCGGTGATGATCATGGAGCTCAAGGACCGGCTCCAGGAACGGCTGGACGGGCTGGAGACGATCAGCGTGCAGGACCTGCTGCCCCGGCTGTCCTCGGTCGGTGACCTCGTCGACTACCTCCAGGATCGCGCCGGTTCGGCCGTCGCGTAG
Protein sequence:
MRPVAIVGIDCRFPGAPDTAAYWDMLMRSGDGVEKVPRQRWDARAFHSRAGAEGHSNTTEGGFISDPDAFDNEFFTVSPREAAAMDPQQRLLLQCAWRAVEDAGVAPQRLAGTNTGVFVGIMGNEWAHLHMTDYAQVTAQLGSGNGYCMTANRVSYHLDLKGPSLAVDTACSSSLVAVHLACNALLAGECDTAIAAGVNVALTPALGIFYTQAGLSAPDGRCKPFSADADGIGRGEGVGAVVLRRLEDAIADGQPVYAVIRGTAVNQDGRSNGITAPNRWSQQEVLAAAYRRAGVEPSDVVFTEAHGTGTVLGDMIETKALGQLHAGRSGRPLALGSVKGNIGHTEGAAGIAGLIKVALSLHHKTVPASRFAARENPALKLAKLGIRLLKAPLRLRSGPAIGGLSSFGMGGTNAHAVLESAPPYAARPEGGDPESGSTGRSTGATGLGAGVFTLTAPSTAALRRNLLVQAEALEKRRVPAGPLSWSSNRTKTGHRYRFAVPARDTGELAATLREAAGDEDLLARLVGNAAGKPQVALLFTGQGSQYPAMTARLYLQSPLYRRFLNEADEALAPHVGGSVRDLLLSGDEAVHRTGWAQPALFAVEYAVAASLGELGVPQALLLGHSVGEYAAAVLAEVFPLEQAARLIAARGALMEQLPEGGGMLAVRAPLAELTELVDSEPLVGVGAVNGPRATVLSGDLAALGRIDDELTRRGVRTRRLEVSHAFHSPLMDPMLDRFAALADETGGGVPKLPVYSTVRGRLLEAEPMDAKYWTEHISAPVLFGDAMSRLLEAGPTHLVETGPRPVLSRMARSLRSAAGAGVHSVAPVSGEEADGRTFAEALAELFRSGLDPRWDAVYPQEERQPQRLAPYAFSDAHRFWARTPVRAAPAADLSVVPDRADTAPHQREQESAPGHGAVLTAVLPAAPEDVSTAPVARAVIEAVAEVGGYATDEVSRQSLLYEDLGFDSVMIMELKDRLQERLDGLETISVQDLLPRLSSVGDLVDYLQDRAGSAVA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 106924 | 1016 | 5.66 | -0.073 | 41.39 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001227,IPR036736,IPR014043,IPR016035,IPR018201,IPR014031,IPR014030,IPR016036,IPR020841,IPR009081,IPR016039
Pfam: PF00698,PF00109,PF02801,PF00550
SMART: SM00827,SM00825
KEGG: scb:SCAB_62941
PRINTS: