Effector profile
PlantPEAD ID: PlantPEAD15470 Uniprot ID: A0A0P9QKG5 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 53409 Pathogen type: Bacteria
Species: Pseudomonas coronafaciens Strain: pv. garcae strain 2708 Other name:
Gene name: AvrD1 NCBI Gene ID: KY362367
Entry name: A0A0P9QKG5_9PSED Protein name: Syringolide biosynthetic protein AvrD1
DOI:
Gene/Protein information
Gene sequence:
ATGCAAGACCTTAGCTTTAGCACTATAGAAAATCATTTGGGACCCGCTAAAGATCGTTTCTTTGGTGATGGTTTCAAACATGTGGAGTATAGTGCTAGACATGTTAATCTTACTGAAAGTGCAGCGAACGCAAGTATAAGTCTTAGCTACCCAGCCAACTGGTCAAAAAAGAACGATAGTGGCGAACTAATACCGCACTTGAGCTCCATTGACGCATTGACAATTTCAATTAATCTAAGCCAGGATATTCTACTGAATAGATTCAAAAGTATTGATCACTGTTGGGTGAGAAGAATATCTATCAAGGCCGGAAAAAAACCTGAAGAAGATCTACGTAATATCAATGCGAAAATAACTAAAGAAAGCCAAGGCTTGGACTCCCAAGGGGATACGAATTTAATTTTTGGTGGTAATGTTGGCACGATGACAGTGCAGTTGGAGTTCATCATTCCCGCCGCTCACGAAGTCGACACCATTAAGGATAGTACCGAGAAAAATTGTTACTCTCTACATTTTAAAAATCGCACTCAATTCATCGACGATATTATTTTTTACTCGCCACTCAACGCCATATCAAAACTTTTTGTCGCTAATGATAACGAGCCCCATTTTTCACCTGGCGGAATCGAGGCTAATTACCCTAACATTATAAATCCCGTAGATTCACTTGTCAGTCACGCACAAATAGCGCAAGCACTTCTTTACAAACTCGATGGTTTGACTCGTGGTGAATCAAATACCTTATGGATGAGGAACTTGAATATTATCGCCGAGAATCCCGCAAAGCGCAGAGCGGCGACTCGATTACTAGCAACCGAACTAAAACGTGCTAATATTCTTTCAGTAAAGGGTGAAAACTGGCGAGTAGCGGAAGTGGCTGGACATATGAATGGTATCACCTTTTCTAGTTCAGTTGCGCATTTATTACCCCTTTAG
Protein sequence:
MQDLSFSTIENHLGPAKDRFFGDGFKHVEYSARHVNLTESAANASISLSYPANWSKKNDSGELIPHLSSIDALTISINLSQDILLNRFKSIDHCWVRRISIKAGKKPEEDLRNINAKITKESQGLDSQGDTNLIFGGNVGTMTVQLEFIIPAAHEVDTIKDSTEKNCYSLHFKNRTQFIDDIIFYSPLNAISKLFVANDNEPHFSPGGIEANYPNIINPVDSLVSHAQIAQALLYKLDGLTRGESNTLWMRNLNIIAENPAKRRAATRLLATELKRANILSVKGENWRVAEVAGHMNGITFSSSVAHLLPL
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
34522.1 311 6.6 -0.268 39.92
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.