Effector profile
| PlantPEAD ID: PlantPEAD15471 | Uniprot ID: A0A0P9R9F7 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. helianthi strain ICMP4531 | Other name: |
| Gene name: | NCBI Gene ID: LJQM01000209 | |
| Entry name: A0A0P9R9F7_9PSED | Protein name: Syringolide biosynthetic protein AvrD1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCAAGACCTTAGTTTTAGCAATATAGAAAATCATTTGGGACCCGCTAAAGATCGTTTCTTTGGCGATGGTTTCAAACATGTGGAGTATAGTGCTAGACATGTTAACCTCACTGAAAGTACAGTGGACGCAAATATAACTCTTAGCTACCCAGCCAATTGGTCAAAAAAGAACGGTAGTAGTGAACTAGTACCGCACTTAAGCACCATTGACGCATTGACAATTTCAACTAATTTAAGCCAGGATATTCTACTGAATAGCTTCAAAAGCATTGATCACTGTTGGATGAAAAGAATATCTATCAAGGCCGGAAATAAACCTGAAGAAGATCTACGTAATATTAATGCTAAAATAACTAAAGAAATCCAAGGATTGGACTCTCAAGGCGATACGTATTTAATTTTCGGTGGTAACGTTGGCACGATGAAAGTTCAGTTGGAGCTCATCATGCCAGCCGCTCACGAAATCGAAACCGTTAAGGATAGTGTCGAAAAAAGTTGTTACTCTCTACATTTTAAAAATCGCACTCAATTCATCGACGATATTATTTTTTACTCGCCACTCAACGCCATATCAACACTTTTTGTCGCTTATGATAAAGAGCCCCATTTTTCACCTGGCGGAATCGAGGCTGGTTACCCTAACATTATGAACCCCGTAGATTCACTTGTCAGTCACGCACAAATAGCGCAATCACTTCTTTATAAACTCGATGGTTTGACTCGTGGTGAATCAAACACCTTATGGATGAGGAGTTTGAATATTATCGCCGAGAATCCCGCAAAGCGCATAGCGGCGACTCGATTACTAGTAACCGAACTAAAGCGTGCTAATATTGTTTCAGTAAAGGGTAAAAATTGGCGAATAGCGGAAGTGGCTGGACATATGAATGGTATCACCCTTTCTAGTTCAGTTGCGCATCTATTACCCCTTTAG
Protein sequence:
MQDLSFSNIENHLGPAKDRFFGDGFKHVEYSARHVNLTESTVDANITLSYPANWSKKNGSSELVPHLSTIDALTISTNLSQDILLNSFKSIDHCWMKRISIKAGNKPEEDLRNINAKITKEIQGLDSQGDTYLIFGGNVGTMKVQLELIMPAAHEIETVKDSVEKSCYSLHFKNRTQFIDDIIFYSPLNAISTLFVAYDKEPHFSPGGIEAGYPNIMNPVDSLVSHAQIAQSLLYKLDGLTRGESNTLWMRSLNIIAENPAKRIAATRLLVTELKRANIVSVKGKNWRIAEVAGHMNGITLSSSVAHLLPL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 34523.4 | 311 | 6.6 | -0.195 | 47.62 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR008799
Pfam: PF05655
SMART:
KEGG:
PRINTS: