Effector profile
| PlantPEAD ID: PlantPEAD15472 | Uniprot ID: A0A0P9SPV0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 47877 | Pathogen type: Bacteria |
| Species: Pseudomonas amygdali | Strain: pv. photiniae strain ICMP7840 | Other name: |
| Gene name: | NCBI Gene ID: LJQO01000508 | |
| Entry name: A0A0P9SPV0_PSEA0 | Protein name: Type III effector avrD1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CTAAAGGGGTAATAGATGCGCAACTGAACTAGAAAGGGTGATGCCATTCATATGTCCAGCCACTTCCGCTATTCGCCAGTTTTTACCCTTTACTGAAACAATATTAGCACGCTTTAGTTCGGTTACTAGTAATCGAGTCGCCGCTATGCGCTTTGCGGGATTCTCGGCGATAATATTCAAACTCCTCATCCATAAGGTGTTTGATTCACTACGAGTCAAACCATCGAGTTTATAAAGAAGTGCTTGCGCTATTTGTGCGTGACTGACAAGTGAATCTACGGGGTTCATAATGTTAGGGTAACCAGCCTCGATTCCGCCAGGTGAAAAATGGGGCTCTTTATCATAAGCGACAAAAAGTGTTGATATGGCGTTGAGTGGCGAGTAAAAAATAATATCGTCGATGAATTGAGTGCGATTTTTAAAATGTAGAGAGTAACAACTTTTCTCGGCACTATCCTTAACGGTTTCGATTTCGTGAGCGGCGGGCATGATGAGCTCCAACTGCACTGTCATCGCGCCAACATTACCAACAAAAAATAAATTCGTATCTCCTTGGGAGTCCAGAACTTGGCTTTCTTTCGTTATTTTCGCATTGATATTACGTAGATCTTCTTCAGGTTTATTTCCGGCCTTGATAGATATTCCTTTCACCCAACAGTGATCAATGCTTTTGAAGCTATTCAGTAGAATATCCTGGCTTAAATTAGTTGAAATTGTCAATGCGTCAATGGTGCTTAAGTGCGGTACTAGTTCACTACTACCGTTCTTTTTTGACCAATTGGCTGGGTAGCTAAGAGTTATATTTGCGTCCACTGCACTTTCAGTGAGGTTAACATGTCTAGCACTATACTCCACATGTTTGAAACCATCGCCAAAGAAACGATCTTTAGCGGGTCCCAAATGATTTTCTATATTGCTAAAACTAAGGTCTTGCAT
Protein sequence:
MQDLSFSNIENHLGPAKDRFFGDGFKHVEYSARHVNLTESAVDANITLSYPANWSKKNGSSELVPHLSTIDALTISTNLSQDILLNSFKSIDHCWVKGISIKAGNKPEEDLRNINAKITKESQVLDSQGDTNLFFVGNVGAMTVQLELIMPAAHEIETVKDSAEKSCYSLHFKNRTQFIDDIIFYSPLNAISTLFVAYDKEPHFSPGGIEAGYPNIMNPVDSLVSHAQIAQALLYKLDGLTRSESNTLWMRSLNIIAENPAKRIAATRLLVTELKRANIVSVKGKNWRIAEVAGHMNGITLSSSVAHLLPL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 34334.1 | 311 | 6.26 | -0.148 | 45.44 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR008799
Pfam: PF05655
SMART:
KEGG:
PRINTS: