Effector profile
| PlantPEAD ID: PlantPEAD15585 | Uniprot ID: A0A0W8DC78 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 4790 | Pathogen type: Oomycota |
| Species: Phytophthora nicotianae | Strain: race 0 | Other name: Brown rot and root rot of citrus agent, buckeye rot agent, pineapple heart rot agent, pistachio foot rot agent, sesame blight agent |
| Gene name: | NCBI Gene ID: LNFO01002733 | |
| Entry name: A0A0W8DC78_PHYNI | Protein name: Crn1 protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAGCTGAAATAACTCAACGTAGGAATAGATCGAGTGACCTGCCTAGCTACAGAACGCGCCATTTCAATATCGGGGCCTAACATGCTGGCGATGTCATAGTATCGTTCGATGCTCTCACGAATTGCACCACCACCTTCTCCGGTAGCTGGTAACGCCTCTCTCAGCTTCAATCTCTTCACGGGAAGTTGGAAACACGGTAGCGTGATCTCGGTGGCAGTACCAGCAGTCGGTGGCTGCGCAAGTAGCGCTTTTATCACTTCGAAAGCCTCACTTGGCTCGTTGATTGCCGCTTTGCAGATACGGGCCGAGTTGTTTATCTTCTCGGCCACCCAGAAGAATAACCACTCACCTTTCAAATCAGTAAGTAGCGCCATTACTGGATCGCCAGCGATCAGATCCAAAGCGATCAGCTCCGACAAAGCCTGAAAGTCGTTGCTTGGTTTAACGTCTCTCTTCACTTCAATCAGCATCTTCACTCCAGGCAAGTACCGTACCTCGGACGGCCTCATCTTTACAAGATCACTCAGTATGAGGAGATCGGTACGTCCAGCAAGCTCAATTTCGCGACCAGGAACTTCAACAGTGAGAATGTTTGTGCCTCTTTCCACGCCGATCACGGAAAGCTGCTTCTTCATAAGCACATCGCCAATGTTGCGTTCCACGTACTCAAGATATAGTTTGCGCTGCTGCTCCTCAGTGAGCACGACCTCTTCGCCGTTTTCAATAATAACTCTCTTCCACTCGAATGGGCCAACCGAAGAACCCTCTCCAGCAGCGAACGGAACTGTGCGCACAAATTCCACCCGAATATCTAAGTCGTTCAGAAGCTGCCTGCCTTGAGTCGAGGTTACCTCCGAGTGGACATATTTGCGTTTCCCTATAGCTTGATTGTGTAGGTCATCTAATTTTGCTGACATTCGCGCCAACGTAGAAGCCTCGCTCGCTGAACCAACTGCACCCTCCGGAACCACCACCAGCACGTGAACTACGTCCTCTCCGAGCGAAACGCCAGGCCCGAAAAGGTTCGGCTTGCTTAGCTTCCACGACGCACGCAT
Protein sequence:
MRASWKLSKPNLFGPGVSLGEDVVHVLVVVPEGAVGSASEASTLARMSAKLDDLHNQAIGKRKYVHSEVTSTQGRQLLNDLDIRVEFVRTVPFAAGEGSSVGPFEWKRVIIENGEEVVLTEEQQRKLYLEYVERNIGDVLMKKQLSVIGVERGTNILTVEVPGREIELAGRTDLLILSDLVKMRPSEVRYLPGVKMLIEVKRDVKPSNDFQALSELIALDLIAGDPVMALLTDLKGEWLFFWVAEKINNSARICKAAINEPSEAFEVIKALLAQPPTAGTATEITLPCFQLPVKRLKLREALPATGEGGGAIRESIERYYDIASMLGPDIEMARSVARQVTRSIPTLSYFS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 38681.7 | 351 | 5.55 | -0.027 | 44.82 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: