Effector profile
| PlantPEAD ID: PlantPEAD15964 | Uniprot ID: C9SKL6 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1051613 | Pathogen type: Fungi |
| Species: Verticillium alfalfae | Strain: strain VaMs.102 / ATCC MYA-4576 / FGSC 10136 | Other name: Verticillium wilt of alfalfa,Verticillium albo-atrum |
| Gene name: | NCBI Gene ID: DS985219 | |
| Entry name: C9SKL6_VERA1 | Protein name: Necrosis-and ethylene-inducing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGTTTCCAAGATCTTCTCCACCCTCGCTTCCATCGCGCTCGTCGCGGCTGGGCCTATCAGCCTCCGGGCTGTCGTGCCTCACGACTCTCTGAACCCCGTGACGCAGCGAGTCCAGACCGGAGCTATTGGAGACGCCATTGCCAAGTTCAACCCTCTTCTCCACATTGCCAATGGCTGCCAACCCTACACGGCCGTCAACGATGCCGGCGATACCAGCGGCGGTCTGCAGGACAGTGGCAACATTTCTGCGGGGTGCAGGGACCAGTCCAAGGGCCAGACCTACGCCCGCGCCAAGGTGGTCAACGGGCAGCTGGCCATCATGTACTCGTTCTACATGCCCAAGGACCAGCCGATCGCGGGCAACGTGGCAGGCGGGCACCGGCACGACTGGGAGAACATTGTCGTCTTCGTCGACGACCCAGCCGCGAACCCGGCACCGGGCATCCTCGGCGGCGCCGCGTCTGGGCACGGCGAGTACAAGAAGACGGCGACGCCGGACCGCGAGGGCGACAGCGTCAAGGTCGAGTACTTCACGACGTTCCCGACCAACCACGAGCTGCAGTTCACGGCGACGACGGGCAAGACGTACCCCATCTCGGACTGGGATGCCATGCCCCAGGCGACGCGCGACGCGCTCGAGACGACCGACTTTGGCAGCGCCAACGTGCCTTTCAAGGACGCCAACTTTGACAGCAACCTCGCCAAGGCGGCGCTCTAG
Protein sequence:
MVSKIFSTLASIALVAAGPISLRAVVPHDSLNPVTQRVQTGAIGDAIAKFNPLLHIANGCQPYTAVNDAGDTSGGLQDSGNISAGCRDQSKGQTYARAKVVNGQLAIMYSFYMPKDQPIAGNVAGGHRHDWENIVVFVDDPAANPAPGILGGAASGHGEYKKTATPDREGDSVKVEYFTTFPTNHELQFTATTGKTYPISDWDAMPQATRDALETTDFGSANVPFKDANFDSNLAKAAL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 25200.1 | 239 | 5.42 | -0.241 | 34.46 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR008701
Pfam: PF05630
SMART:
KEGG: val:VDBG_05343
PRINTS: