Effector profile
PlantPEAD ID: PlantPEAD16159 Uniprot ID: A0A0Q0DFW6 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 47877 Pathogen type: Bacteria
Species: Pseudomonas amygdali Strain: pv. ulmi strain ICMP3962 Other name:
Gene name: NCBI Gene ID: LJRQ01000409
Entry name: A0A0Q0DFW6_PSEA0 Protein name: Type III effector avrA1
DOI:
Gene/Protein information
Gene sequence:
CCGCCCATGACGGAAATTTCTGGGATTCCGGCTTGCAATCCCTATAAGACTATAGTCTGGACTTAACAGTTGGACCGGCTCCAGTCGGAGGTTGGAGAAGCTTGGAAGAAAGAAAGAGCTCGATTCCACGCATTATGTCATAGGCATTGAAGTTCAAGAGGCTCAGCTCTCGAATTCGACTTCCCTCCACGTTCTTTTCATAAACACAAAGCGAAACACCTTGGCGCAATGCCTCACAAACCTTTTCCGCAACTGCTTTCCTTTCATCAAAAGGCAGTCCCCAAAGCTTTTTCAGCGTAGCTTCCTTGTTTAGGGCAGCATTTTGGCCAAACCAAGACAATTGACGCTCAAGAAAATTCGTGATTAATTTTCCATCGTAGCCTTCATCCTCAATATAACGCGCGGCGGACAACATTTCGAGGTTGAACTCGATCAACGTCGCTACAGCTACCGGGCGTGACATCCCAACCTCTATAGCTTTAGCATCCCATAATTCCAGCTTAGCGCAATATTCGTTGTGCCTCAAAGTGGAGTTTGGCTTTCTTGACTGAAGCATGCATTGGGCGTCGGCCAACTCATCAATAGAGTGCTTAAAATCAAATGACTCTCTATCCGGGTCATGCTTAATGTAAGGCTTCAAACTATTCTCGATAAAACCCATTTTCTCGGCATGACTTAGTGAATTGCGGATACTTGAGAATTCGGAACTAAATGCCTTGTTCGAGTTGAATGAATGAACATCTCCAAATCCTGGTCGTGCAACGGCATACTCGGGTAGATCAACGGATGCCGTCACCTTATATAATACTGAAGGCAACCCTTTCCACTTTGGCCTATGGGGTACTTTCATCTCAGATATGGTGTCGCCTTTTGCTTTTGCATTTATAACGGAAAAAGGCGTCATCACAATATCAAATGCGGTCGAATTATCGCAAAGGGTATCAACTTCTCTTTTTGCTGGCGTTTTCCCGGCAGATCCAAAACTGCTCGTAGCCTCATGATCATGAGAGAATCGCAGACTTCGGACCATCAAAGGTTCTCCAAGAGCGTAGTCTCTAGAAACTACTGGCTTGTCATTTACTAGAAGCTCCTTAACAGATGACTTAGTGATTGCTTCCTTGAGAGTAGCAGAATTTCCAGCCTTGCCCATTTCGCTGTAAAGTTCCGCTACTTTTTGTACTATCTTCTTTTTTTCTAAGACCCGTCGAAGTTGCGGAGTTTGGAGAGAGGTGACGTCGATCTTATATCCACCTTTACCGGACGCCTCTTCAATAGAGCGATCAGCTATCTTCATGAGTGTTGCCTTCGCATCAAGAGTGTACCCATATAGCCGATTTTTCACTTCTACCTTGTCAGCCGGATCGACTCCATCAATAGTTAATGAGATTGCTCCATGAATTTCAGCATAACTATGGGTGAATACTTCGCATCTATCTACCTCCTTGTAAGGAAGACCTTGGTTCTTTCGGATGCTATTCATACGTAGCGCCATTACTACAGCAGGGCCATTCCTCCTAAAAAAATCCATTGACAAGTCGATTAAGGCATGTTTTGCCTGGTCGATTGTCAACTCTGGTGCCGACCATTGAAGACCAGCGTGCATAGCAGCATAGCGCGCAGCGATAACCACATCTGACGATGTTCCTGATGTTCCCGACATAACGGGAACCTGAAAGAATTCCCGGATATCGGTGCCTACATCGGCAGACAGGTCCAGTCCTGATAAGCTCTTAACTGAATGTGTTCCTGAACGGTTAGCATCATGTCGATTTTTTAAACGAAATGCCATTCGTGGTTGTATCTTTAACCTTCCTGCCAACAATTCTCCCTCTTGACATATTTCAAAGCCTACTTTCACCTGATCTTGAGTAAAAGGGCCTGACTCTCCTTTCAACATCATTGCAAAAGCGGACGCTGCCTCATCTGAGATTTTCCAAGCTCGTGGTTTGAAATAAGGAGATTGGTCATCTGGCTTTTTGAGCCCGAGGACCTCGTTGCCCAGCTGTTGACGGTCATGAAATTGCAGTGCAGGCTCATCTCTCCACAGGCTGCGCTCTAAATGGCAAAGCCATTCTGACTGTTTATGAGCAAATGAGTTTACATCCTTCATTGCGAAGCAAGCATTAGATATAATTTCTTTTTCGGCACTTATATGGTTTAGATATGCGAGCGCACGCTTACGAAGGTGCCGTTCTGAACGATAGGCATTGTTCGACAGAGATCGTGAGAGAAAGTCGGCTATTGTTGAATCTGTTTTTTCATGGGGATGATAAACTTTGCCTCCAATAGTTGCTGCCCCATAGCTTTTTTTTGACTTAGGCACGCGGCGTGGAGCAGGCGACAATGAACATCTAAGTGCCGAGGGGGCTGAAGATTTATTTATATCTCCATTAGAGCCTGCTTTATTTTTATGAAAGTCATCATTTTTCGAGCCGATCGAAATTTGCGATGCATCACATGATGAATTTTTAGCAGTGCCAAGTTTTTCGGAAACAGATTGCGTTTTTGTTGCATCTCCTATTTCTGGAGCTTTTGAATGACAATGCTGAACATGCGCCTGGATTTCTGCTTGCTCGACAAGGTGTCGGCCACGGTCTTCTGCTTGCTGGATAGGGTACTGATCGTTTTGCAACTGATCGTGCGGCGCCTTGCCCTCGGGTTGGGCTGCGGACATGGCATCAAAAGGACAAATTTTTTCAGGCGGCGTTTGCGCTTCCAAAGGCAATTTATACGCGCCTAAGTTGTTGCTTGATTTACTGACGTTCCACATTGATTTATCCTAGAATTAATGGTATTGCCGAGTCACATTAGGGTCTTGATGCATAGGCATTTCAAAAATGCTATGGCCTATGCATGAACACGCCTTTGGCCATCTCGGCACGTTGAGAGCGAACTTCAGCATCACCCAGTGTCGCCACTACATCCGTGATGTGCACAAAGCCCTCAGCCTGCAATTGCTTTCCCAAGGTGTAGGTCACAACATCATCTGGGTCCTTGTTAGGGTTAGTGAAAAACCACGTATCCTTAGGATGAGACGTGAGGTGGTATAGGCTGCGGTGATAGGACGATGCATTGAGTCGACCTCCTGGATAGATGAACCTGCTGTGTGGCAAGCAACGCCGTTTCGGTTTCATCAGAACGACATTCGGCGTACACCCTCTAATAAGGGGCCTACGCCCAGTTGATCCTAGTGTGGTGTTTCAC
Protein sequence:
MWNVSKSSNNLGAYKLPLEAQTPPEKICPFDAMSAAQPEGKAPHDQLQNDQYPIQQAEDRGRHLVEQAEIQAHVQHCHSKAPEIGDATKTQSVSEKLGTAKNSSCDASQISIGSKNDDFHKNKAGSNGDINKSSAPSALRCSLSPAPRRVPKSKKSYGAATIGGKVYHPHEKTDSTIADFLSRSLSNNAYRSERHLRKRALAYLNHISAEKEIISNACFAMKDVNSFAHKQSEWLCHLERSLWRDEPALQFHDRQQLGNEVLGLKKPDDQSPYFKPRAWKISDEAASAFAMMLKGESGPFTQDQVKVGFEICQEGELLAGRLKIQPRMAFRLKNRHDANRSGTHSVKSLSGLDLSADVGTDIREFFQVPVMSGTSGTSSDVVIAARYAAMHAGLQWSAPELTIDQAKHALIDLSMDFFRRNGPAVVMALRMNSIRKNQGLPYKEVDRCEVFTHSYAEIHGAISLTIDGVDPADKVEVKNRLYGYTLDAKATLMKIADRSIEEASGKGGYKIDVTSLQTPQLRRVLEKKKIVQKVAELYSEMGKAGNSATLKEAITKSSVKELLVNDKPVVSRDYALGEPLMVRSLRFSHDHEATSSFGSAGKTPAKREVDTLCDNSTAFDIVMTPFSVINAKAKGDTISEMKVPHRPKWKGLPSVLYKVTASVDLPEYAVARPGFGDVHSFNSNKAFSSEFSSIRNSLSHAEKMGFIENSLKPYIKHDPDRESFDFKHSIDELADAQCMLQSRKPNSTLRHNEYCAKLELWDAKAIEVGMSRPVAVATLIEFNLEMLSAARYIEDEGYDGKLITNFLERQLSWFGQNAALNKEATLKKLWGLPFDERKAVAEKVCEALRQGVSLCVYEKNVEGSRIRELSLLNFNAYDIMRGIELFLSSKLLQPPTGAGPTVKSRL
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
100515 906 8.71 -0.48 42.62
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.