Effector profile
| PlantPEAD ID: PlantPEAD16236 | Uniprot ID: A0A0P9TG36 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. maculicola strain ICMP3935 | Other name: |
| Gene name: | NCBI Gene ID: LJQR01000163 | |
| Entry name: A0A0P9TG36_PSEYM | Protein name: DNA polymerase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAAAAGTCATCTTCTGAGTCAGACTGAACAGCTCTTAATAACTCGCCTGCACGGCTTGTGGAAACTTCAAAGCCCGCATTGGAGAGTTCTTTTTTAAAAACCTTTGCATCTGCTCCCGGCTGGCTGCTCTTGCTTCCAACAATGTATTTTTTAGGTATTGAATCTGTCGTTCTGCAGCTGAATTGGGATATTTCACCATTCTCGTCTTTCGATTCAGGATCTAGCTCAATATTAAAATTGCTCTTGACACCTATAGTTCTAACTAGGGCTGGGGATTCGGGGTCTGCTCTTCGAGCATAATTCTTAGCTGTTACATCATACGCTGTTAAGTAGTTGTGACGTCTAGCATTTCTGATGAGCGTGTCTGTAGGGGCTGAGTTCGATGTTCTAGATCCCTCGGTTGCACCATCAGTTTTTCTATTCACATCAAACCCTTGCCTTCTCAAATCTATTTTTGATTGCATAGATGTACCATGCCACAAAACAGACTCTTTATACACTCTCCTCGCATTGGGTATTAAGTTAACATTGGAATGCTCGGAATCGGTTTCGTAGCCGCGATCATGCCTGTTCGTCGGGCTACTTGCCAC
Protein sequence:
MASSPTNRHDRGYETDSEHSNVNLIPNARRVYKESVLWHGTSMQSKIDLRRQGFDVNRKTDGATEGSRTSNSAPTDTLIRNARRHNYLTAYDVTAKNYARRADPESPALVRTIGVKSNFNIELDPESKDENGEISQFSCRTTDSIPKKYIVGSKSSQPGADAKVFKKELSNAGFEVSTSRAGELLRAVQSDSEDDF
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 21805.9 | 196 | 7.84 | -0.927 | 57.56 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: