Effector profile
| PlantPEAD ID: PlantPEAD16246 | Uniprot ID: A0A0N8SKK1 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 29438 | Pathogen type: Bacteria |
| Species: Pseudomonas savastanoi | Strain: pv. retacarpa strain ICMP16945 | Other name: |
| Gene name: | NCBI Gene ID: LJRD01000382 | |
| Entry name: A0A0N8SKK1_PSESS | Protein name: Avirulence protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTATTGGTTGATTCTGCGGTCTTCGTTTCTGAGTACCGCAAAGCGTCTCTGTAGGTCAGCAAGGTCAGCCCGTGCATGGCGCAGCTGTTGTGAAGTATTGGCTATTTCGGCTGGGTTGGCCTCATCTATAGCGTCTTGAAGCTCGTCCGTGAGATTGTTAACCATGAGTTGCTTATCTTCGATTTCTTGCCTCAATGCAGCACCAGCTCCACGTGGGCAGACTTGTACGTCGCGTGACGATGAGCCAATTTGATAGACTCGTTTACCTCCACCCAATAGGGATTTGGGTGTAAATGGGATTTCTAGCCCGCCAGCCGCAGGTTTGAAATCTCGTTGTTGGAGCTTGTTGAGAGCGTTCAGGTGAGGGCTATTGGAAGGGCCCGCTTGAGTGTTAATGTCTAGGCGTTGAGCATCAAAAGATTTAGCTAATAGCGCGTTCTGCCGGTACTGGTGAGATGAACTCTCACACAATTGGCGCAGTCGCTGTGCATGCATGCTTAATACCGCCCCCGGCTTTTTTTGCCCCTCTGACGCCTGGGCGACAGCGGTTGTGGTGCCAGGTGGAGAGGAGTTGGTGGGGGCTGAGGAAACGCGGTTTTGCGCTTCCTCTGCAGGGGCCGAGTAACTGAAGCTGGAATTTACTGAACTGGTTGAAATTCGAGTCAT
Protein sequence:
MTRISTSSVNSSFSYSAPAEEAQNRVSSAPTNSSPPGTTTAVAQASEGQKKPGAVLSMHAQRLRQLCESSSHQYRQNALLAKSFDAQRLDINTQAGPSNSPHLNALNKLQQRDFKPAAGGLEIPFTPKSLLGGGKRVYQIGSSSRDVQVCPRGAGAALRQEIEDKQLMVNNLTDELQDAIDEANPAEIANTSQQLRHARADLADLQRRFAVLRNEDRRINQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24005.7 | 221 | 9.26 | -0.688 | 58.58 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR048928,IPR048927
Pfam: PF21611
SMART:
KEGG:
PRINTS: